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TPRX1 tetrapeptide repeat homeobox 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718383, updated on 5-Mar-2024

Summary

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Gene symbol
TPRX1
Gene description
tetrapeptide repeat homeobox 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human all
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Genomic context

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See TPRX1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (47817140..47819700, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (43191086..43193368, complement)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene NOP53 ribosome biogenesis factor Neighboring gene small nucleolar RNA SNORD23 Neighboring gene selenoprotein W Neighboring gene uncharacterized LOC106994809 Neighboring gene cone-rod homeobox

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetra-peptide repeat homeobox protein 1
Names
tetra-peptide repeat homeobox 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    47817140..47819700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028839094.1 → XP_028694927.1  tetra-peptide repeat homeobox protein 1

    Conserved Domains (2) summary
    PHA03247
    Location:116 → 417
    PHA03247; large tegument protein UL36; Provisional
    pfam00046
    Location:33 → 74
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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