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NOP56 NOP56 ribonucleoprotein [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718202, updated on 17-Aug-2024

Summary

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Official Symbol
NOP56provided by VGNC
Official Full Name
NOP56 ribonucleoproteinprovided by VGNC
Primary source
VGNC:VGNC:75181
See related
Ensembl:ENSMMUG00000013888
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See NOP56 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (63840421..63846582, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (35480288..35486095)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene EBF family member 4 Neighboring gene small nucleolar RNA SNORD57 Neighboring gene small nucleolar RNA SNORD56 Neighboring gene small nucleolar RNA SNORD86 Neighboring gene small nucleolar RNA SNORA51 Neighboring gene small nucleolar RNA SNORD110 Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta Neighboring gene transmembrane channel like 2 Neighboring gene zinc finger protein 343

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of box C/D methylation guide snoRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar protein 56

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    63840421..63846582 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015149408.2 → XP_015004894.1  nucleolar protein 56 isoform X1

    UniProtKB/TrEMBL
    F6R553, G7N2S9, H9ES07
    Related
    ENSMMUP00000018256.3, ENSMMUT00000019496.4
    Conserved Domains (2) summary
    COG1498
    Location:48 → 416
    SIK1; RNA processing factor Prp31, contains Nop domain [Translation, ribosomal structure and biogenesis]
    pfam08156
    Location:5 → 70
    NOP5NT; NOP5NT (NUC127) domain

  2. XM_015149410.2 → XP_015004896.1  nucleolar protein 56 isoform X2

    Conserved Domains (3) summary
    smart00931
    Location:168 → 219
    NOSIC; NOSIC (NUC001) domain
    COG1498
    Location:48 → 416
    SIK1; RNA processing factor Prp31, contains Nop domain [Translation, ribosomal structure and biogenesis]
    pfam08156
    Location:5 → 70
    NOP5NT; NOP5NT (NUC127) domain
Nucleotide Protein
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Gene LinkOut

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Research Materials