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XYLT1 xylosyltransferase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718187, updated on 17-Aug-2024

Summary

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Official Symbol
XYLT1provided by VGNC
Official Full Name
xylosyltransferase 1provided by VGNC
Primary source
VGNC:VGNC:78977
See related
Ensembl:ENSMMUG00000017131
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See XYLT1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (16748507..17118895)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (17063062..17433499)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene nodal modulator 1 Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene uncharacterized LOC114674375 Neighboring gene uncharacterized LOC114674374 Neighboring gene UPF0454 protein C12orf49-like Neighboring gene uncharacterized LOC114674335

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    16748507..17118895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015125707.2 → XP_014981193.1  xylosyltransferase 1

    UniProtKB/TrEMBL
    F7H2Y6, H9F649
    Related
    ENSMMUP00000022537.3, ENSMMUT00000024084.4
    Conserved Domains (2) summary
    pfam12529
    Location:613 → 793
    Xylo_C; Xylosyltransferase C terminal
    cl27418
    Location:328 → 580
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials