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CCZ1 CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718128, updated on 5-Mar-2024

Summary

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Gene symbol
CCZ1
Gene description
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated
See related
Ensembl:ENSMMUG00000007970
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
CCZ1B
Orthologs
human mouse all
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Genomic context

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See CCZ1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (40006185..40035396, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (40826204..40875618, complement)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene aminoacyl tRNA synthetase complex interacting multifunctional protein 2 Neighboring gene radial spoke head 10 homolog B Neighboring gene PMS1 homolog 2, mismatch repair system component Neighboring gene oncomodulin Neighboring gene heparan-sulfate 6-O-sulfotransferase 1 pseudogene Neighboring gene lemur tyrosine kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mon1-Ccz1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar fusion protein CCZ1 homolog
Names
vacuolar fusion protein CCZ1 homolog-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    40006185..40035396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015133273.2 → XP_014988759.1  vacuolar fusion protein CCZ1 homolog isoform X1

    UniProtKB/TrEMBL
    H9FVN6, H9H486
    Related
    ENSMMUP00000028353.3, ENSMMUT00000030300.4
    Conserved Domains (1) summary
    pfam08217
    Location:27 → 479
    DUF1712; Fungal domain of unknown function (DUF1712)

  2. XM_028845139.1 → XP_028700972.1  vacuolar fusion protein CCZ1 homolog isoform X3

    UniProtKB/TrEMBL
    H9FVN6
    Conserved Domains (1) summary
    pfam08217
    Location:27 → 421
    DUF1712; Fungal domain of unknown function (DUF1712)

  3. XM_028845138.1 → XP_028700971.1  vacuolar fusion protein CCZ1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A5F8AIV3, H9FVN6, H9Z9Y4
    Related
    ENSMMUP00000076893.1, ENSMMUT00000106960.1
    Conserved Domains (1) summary
    pfam08217
    Location:27 → 451
    DUF1712; Fungal domain of unknown function (DUF1712)
Nucleotide Protein
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