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FTSJ3 FtsJ RNA 2'-O-methyltransferase 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718009, updated on 17-Aug-2024

Summary

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Official Symbol
FTSJ3provided by VGNC
Official Full Name
FtsJ RNA 2'-O-methyltransferase 3provided by VGNC
Primary source
VGNC:VGNC:72734
Locus tag
EGK_08867
See related
Ensembl:ENSMMUG00000016768
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See FTSJ3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
22
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (60272402..60279954, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (57428461..57436028, complement)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 47 Neighboring gene DEAD-box helicase 42 Neighboring gene proteasome 26S subunit, ATPase 5 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA (uridine-2'-O-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
Names
FtsJ RNA methyltransferase homolog 3
FtsJ homolog 3
putative rRNA methyltransferase 3
NP_001253060.1
XP_014975545.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266131.1 → NP_001253060.1  pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3

    See identical proteins and their annotated locations for NP_001253060.1

    Status: PROVISIONAL

    Source sequence(s)
    JV046137
    UniProtKB/TrEMBL
    A0A5F7Z8V7, A0A8J8XXN5, F7DBK9, G7NJ83
    Related
    ENSMMUP00000074711.1, ENSMMUT00000091893.1
    Conserved Domains (3) summary
    COG0293
    Location:8 → 203
    RlmE; 23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ [Translation, ribosomal structure and biogenesis]
    pfam07780
    Location:640 → 830
    Spb1_C; Spb1 C-terminal domain
    pfam11861
    Location:232 → 397
    DUF3381; Domain of unknown function (DUF3381)

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    60272402..60279954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015120059.2 → XP_014975545.1  pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 isoform X1

    UniProtKB/TrEMBL
    A0A5F7Z8V7, A0A8J8XXN5, F7DBK9, G7NJ83
    Conserved Domains (3) summary
    COG0293
    Location:8 → 203
    RlmE; 23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ [Translation, ribosomal structure and biogenesis]
    pfam07780
    Location:640 → 830
    Spb1_C; Spb1 C-terminal domain
    pfam11861
    Location:232 → 397
    DUF3381; Domain of unknown function (DUF3381)
Nucleotide Protein
Heading Accession and Version

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