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FLRT1 fibronectin leucine rich transmembrane protein 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717942, updated on 17-Aug-2024

Summary

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Official Symbol
FLRT1provided by VGNC
Official Full Name
fibronectin leucine rich transmembrane protein 1provided by VGNC
Primary source
VGNC:VGNC:72675
See related
Ensembl:ENSMMUG00000000482
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See FLRT1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (10421307..10513011, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (10416143..10498993, complement)

Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene stress induced phosphoprotein 1 Neighboring gene uncharacterized LOC114672238 Neighboring gene mono-ADP ribosylhydrolase 1 Neighboring gene uncharacterized LOC114672239 Neighboring gene OTU deubiquitinase, ubiquitin aldehyde binding 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat transmembrane protein FLRT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041767.1 Reference Mmul_10 Primary Assembly

    Range
    10421307..10513011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028833309.1 → XP_028689142.1  leucine-rich repeat transmembrane protein FLRT1

    UniProtKB/TrEMBL
    F6YJL6, G7NCJ9, H9ES05
    Conserved Domains (4) summary
    PRK15370
    Location:58 → 329
    PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
    TIGR00864
    Location:300 → 406
    PCC; polycystin cation channel protein
    sd00033
    Location:108 → 128
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:441 → 509
    fn3; Fibronectin type III domain

  2. XM_001115424.4 → XP_001115424.1  leucine-rich repeat transmembrane protein FLRT1

    See identical proteins and their annotated locations for XP_001115424.1

    UniProtKB/TrEMBL
    F6YJL6, G7NCJ9, H9ES05
    Conserved Domains (4) summary
    PRK15370
    Location:58 → 329
    PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
    TIGR00864
    Location:300 → 406
    PCC; polycystin cation channel protein
    sd00033
    Location:108 → 128
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:441 → 509
    fn3; Fibronectin type III domain

  3. XM_028833308.1 → XP_028689141.1  leucine-rich repeat transmembrane protein FLRT1

    UniProtKB/TrEMBL
    F6YJL6, G7NCJ9, H9ES05
    Related
    ENSMMUP00000000655.1, ENSMMUT00000000707.3
    Conserved Domains (4) summary
    PRK15370
    Location:58 → 329
    PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
    TIGR00864
    Location:300 → 406
    PCC; polycystin cation channel protein
    sd00033
    Location:108 → 128
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:441 → 509
    fn3; Fibronectin type III domain
Nucleotide Protein
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