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TRPT1 tRNA phosphotransferase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717911, updated on 17-Aug-2024

Summary

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Official Symbol
TRPT1provided by VGNC
Official Full Name
tRNA phosphotransferase 1provided by VGNC
Primary source
VGNC:VGNC:79242
See related
Ensembl:ENSMMUG00000012940
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TRPT1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (10317400..10319841)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (10301608..10303895)

Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene vascular endothelial growth factor B Neighboring gene DnaJ heat shock protein family (Hsp40) member C4 Neighboring gene nudix hydrolase 22 Neighboring gene FERM domain containing kindlin 3 Neighboring gene uncharacterized LOC114672238 Neighboring gene stress induced phosphoprotein 1 Neighboring gene mono-ADP ribosylhydrolase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA 2'-phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA 2'-phosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041767.1 Reference Mmul_10 Primary Assembly

    Range
    10317400..10319841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028833304.1 → XP_028689137.1  tRNA 2'-phosphotransferase 1 isoform X11

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:31 → 205
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  2. XM_028833305.1 → XP_028689138.1  tRNA 2'-phosphotransferase 1 isoform X12

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:31 → 204
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  3. XM_028833307.1 → XP_028689140.1  tRNA 2'-phosphotransferase 1 isoform X13

    UniProtKB/TrEMBL
    H9EYF1
    Related
    ENSMMUP00000016989.4, ENSMMUT00000018146.4
    Conserved Domains (1) summary
    pfam01885
    Location:31 → 203
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  4. XM_028833302.1 → XP_028689135.1  tRNA 2'-phosphotransferase 1 isoform X5

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:31 → 217
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  5. XM_028833303.1 → XP_028689136.1  tRNA 2'-phosphotransferase 1 isoform X6

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:31 → 215
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  6. XM_015113908.2 → XP_014969394.1  tRNA 2'-phosphotransferase 1 isoform X7

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:36 → 210
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  7. XM_015113910.2 → XP_014969396.1  tRNA 2'-phosphotransferase 1 isoform X8

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:36 → 209
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  8. XM_015113911.2 → XP_014969397.1  tRNA 2'-phosphotransferase 1 isoform X9

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:36 → 208
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  9. XM_015113912.2 → XP_014969398.1  tRNA 2'-phosphotransferase 1 isoform X10

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:36 → 207
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  10. XM_015113904.2 → XP_014969390.1  tRNA 2'-phosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:36 → 221
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  11. XM_015113905.2 → XP_014969391.1  tRNA 2'-phosphotransferase 1 isoform X2

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:36 → 220
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  12. XM_015113906.2 → XP_014969392.1  tRNA 2'-phosphotransferase 1 isoform X3

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:36 → 219
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family

  13. XM_028833301.1 → XP_028689134.1  tRNA 2'-phosphotransferase 1 isoform X4

    UniProtKB/TrEMBL
    H9EYF1
    Conserved Domains (1) summary
    pfam01885
    Location:36 → 219
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family
Nucleotide Protein
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