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CCN5 cellular communication network factor 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717872, updated on 17-Aug-2024

Summary

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Official Symbol
CCN5provided by VGNC
Official Full Name
cellular communication network factor 5provided by VGNC
Primary source
VGNC:VGNC:84569
See related
Ensembl:ENSMMUG00000045256
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
WISP2
Orthologs
human mouse all
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Genomic context

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See CCN5 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (79948985..79962154)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (19736782..19749923, complement)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC107000395 Neighboring gene potassium two pore domain channel subfamily K member 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WNT1-inducible-signaling pathway protein 2
Names
WNT1 inducible signaling pathway protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    79948985..79962154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028828444.1 → XP_028684277.1  WNT1-inducible-signaling pathway protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q1V5
    Related
    ENSMMUP00000042017.2, ENSMMUT00000072780.2
    Conserved Domains (2) summary
    cl17735
    Location:191 → 251
    VWC; von Willebrand factor type C domain
    pfam00219
    Location:133 → 169
    IGFBP; Insulin-like growth factor binding protein

  2. XM_015148950.2 → XP_015004436.2  WNT1-inducible-signaling pathway protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZUZ4, A0A8J8Y5C9, G7N4S0, I0FW36
    Conserved Domains (3) summary
    cl17735
    Location:100 → 160
    VWC; von Willebrand factor type C domain
    pfam00219
    Location:45 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:194 → 237
    TSP1_CCN; CCN3 Nov like TSP1 domain
Nucleotide Protein
Heading Accession and Version

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