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RAP1GAP RAP1 GTPase activating protein [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717830, updated on 17-Aug-2024

Summary

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Official Symbol
RAP1GAPprovided by VGNC
Official Full Name
RAP1 GTPase activating proteinprovided by VGNC
Primary source
VGNC:VGNC:76658
See related
Ensembl:ENSMMUG00000002218
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See RAP1GAP in Genome Data Viewer
Location:
chromosome: 1
Exon count:
29
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (203097563..203171386)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (20368741..20445126, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene heparan sulfate proteoglycan 2 Neighboring gene low density lipoprotein receptor class A domain containing 2 Neighboring gene ubiquitin specific peptidase 48 Neighboring gene U7 small nuclear RNA Neighboring gene alkaline phosphatase, biomineralization associated Neighboring gene E3 ubiquitin-protein ligase PPP1R11 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rap1 GTPase-activating protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    203097563..203171386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028838395.1 → XP_028694228.1  rap1 GTPase-activating protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5R2F4
    Related
    ENSMMUP00000054489.2, ENSMMUT00000065960.2
    Conserved Domains (2) summary
    pfam02145
    Location:211 → 390
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:1 → 17
    GoLoco; GoLoco motif

  2. XM_028838396.1 → XP_028694229.1  rap1 GTPase-activating protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5R2F4
    Conserved Domains (2) summary
    smart00390
    Location:1 → 17
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    pfam02145
    Location:211 → 390
    Rap_GAP; Rap/ran-GAP

  3. XM_028838420.1 → XP_028694253.1  rap1 GTPase-activating protein 1 isoform X4

    UniProtKB/TrEMBL
    G7MHE9
    Conserved Domains (2) summary
    smart00390
    Location:1 → 17
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    pfam02145
    Location:211 → 390
    Rap_GAP; Rap/ran-GAP

  4. XM_028838412.1 → XP_028694245.1  rap1 GTPase-activating protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5Q6S0
    Related
    ENSMMUP00000068757.1, ENSMMUT00000087312.1
    Conserved Domains (2) summary
    smart00390
    Location:1 → 17
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    pfam02145
    Location:211 → 390
    Rap_GAP; Rap/ran-GAP

  5. XM_028838429.1 → XP_028694262.1  rap1 GTPase-activating protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A1D5Q6S0
    Conserved Domains (2) summary
    smart00390
    Location:1 → 17
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    pfam02145
    Location:211 → 390
    Rap_GAP; Rap/ran-GAP

  6. XM_028838431.1 → XP_028694264.1  rap1 GTPase-activating protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A1D5Q6S0
    Conserved Domains (2) summary
    pfam02145
    Location:211 → 390
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:1 → 16
    GoLoco; GoLoco motif

  7. XM_015130302.2 → XP_014985788.1  rap1 GTPase-activating protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A1D5Q6S0, F6W7S0
    Related
    ENSMMUP00000002966.4, ENSMMUT00000003142.4
    Conserved Domains (2) summary
    smart00390
    Location:1 → 17
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    pfam02145
    Location:211 → 390
    Rap_GAP; Rap/ran-GAP

  8. XM_028838425.1 → XP_028694258.1  rap1 GTPase-activating protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A1D5Q6S0, F6W7S0
    Conserved Domains (2) summary
    smart00390
    Location:1 → 17
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    pfam02145
    Location:211 → 390
    Rap_GAP; Rap/ran-GAP

  9. XM_015130288.2 → XP_014985774.1  rap1 GTPase-activating protein 1 isoform X8

    UniProtKB/TrEMBL
    H9EU98
    Related
    ENSMMUP00000002967.4, ENSMMUT00000003143.4
    Conserved Domains (2) summary
    smart00390
    Location:61 → 81
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    pfam02145
    Location:275 → 454
    Rap_GAP; Rap/ran-GAP

RNA

  1. XR_003724797.1 RNA Sequence

  2. XR_001442918.2 RNA Sequence

  3. XR_003724798.1 RNA Sequence

  4. XR_003724796.1 RNA Sequence

  5. XR_001442915.2 RNA Sequence

  6. XR_001442919.2 RNA Sequence

  7. XR_003724799.1 RNA Sequence

  8. XR_003724800.1 RNA Sequence

  9. XR_001442904.2 RNA Sequence

  10. XR_001442911.2 RNA Sequence

Nucleotide Protein
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