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CEP20 centrosomal protein 20 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717817, updated on 17-Aug-2024

Summary

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Official Symbol
CEP20provided by VGNC
Official Full Name
centrosomal protein 20provided by VGNC
Primary source
VGNC:VGNC:99500
Locus tag
EGK_12536
See related
Ensembl:ENSMMUG00000038422
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
FOPNL
Orthologs
human mouse all
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Genomic context

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See CEP20 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (15445833..15467994, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (15669028..15691185, complement)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-484 Neighboring gene nudE neurodevelopment protein 1 Neighboring gene myosin heavy chain 11 Neighboring gene cathepsin D Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L15 pseudogene Neighboring gene ATP binding cassette subfamily C member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule anchoring IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lisH domain-containing protein FOPNL
Names
FGFR1OP N-terminal like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    15445833..15467994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015125698.2 → XP_014981184.1  lisH domain-containing protein FOPNL isoform X4

    UniProtKB/TrEMBL
    A0A1D5Q8M3
    Related
    ENSMMUP00000044391.2, ENSMMUT00000054050.2
    Conserved Domains (1) summary
    pfam09398
    Location:43 → 98
    FOP_dimer; FOP N terminal dimerisation domain

  2. XM_001109724.4 → XP_001109724.3  lisH domain-containing protein FOPNL isoform X1

    UniProtKB/TrEMBL
    A0A1D5QWH5, A0A663DAH9, A0A8J8XGQ0, G7NPQ7, H9F4N9
    Related
    ENSMMUP00000052405.2, ENSMMUT00000077427.2
    Conserved Domains (1) summary
    pfam09398
    Location:43 → 113
    FOP_dimer; FOP N terminal dimerization domain

  3. XM_028840932.1 → XP_028696765.1  lisH domain-containing protein FOPNL isoform X3

    Conserved Domains (1) summary
    cl29685
    Location:3 → 47
    LisH_2

  4. XM_015125697.2 → XP_014981183.1  lisH domain-containing protein FOPNL isoform X2

    UniProtKB/TrEMBL
    H9F4N9
    Conserved Domains (1) summary
    pfam09398
    Location:43 → 113
    FOP_dimer; FOP N terminal dimerization domain
Nucleotide Protein
Heading Accession and Version

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