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HMGA2 high mobility group AT-hook 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717721, updated on 17-Aug-2024

Summary

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Official Symbol
HMGA2provided by VGNC
Official Full Name
high mobility group AT-hook 2provided by VGNC
Primary source
VGNC:VGNC:82157
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See HMGA2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (65405788..65545528)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (64604463..64745037)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene PEST proteolytic signal-containing nuclear protein pseudogene Neighboring gene 40S ribosomal protein SA-like Neighboring gene uncharacterized LOC114670885 Neighboring gene uncharacterized LOC114670886 Neighboring gene uncharacterized LOC107000917 Neighboring gene uncharacterized LOC114670884

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high mobility group protein HMGI-C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    65405788..65545528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001117025.4 → XP_001117025.1  high mobility group protein HMGI-C isoform X1

    See identical proteins and their annotated locations for XP_001117025.1

    UniProtKB/TrEMBL
    A0A1D5QQP6
    Conserved Domains (1) summary
    cl39058
    Location:3 → 75
    RNB; RNB domain

  2. XM_002798668.3 → XP_002798714.1  high mobility group protein HMGI-C isoform X2

    See identical proteins and their annotated locations for XP_002798714.1

    UniProtKB/TrEMBL
    A0A1D5QFK3
    Conserved Domains (1) summary
    cl39058
    Location:3 → 75
    RNB; RNB domain

  3. XM_015152210.2 → XP_015007696.1  high mobility group protein HMGI-C isoform X3

    Conserved Domains (1) summary
    TIGR02102
    Location:14 → 99
    pullulan_Gpos; pullulanase, extracellular, Gram-positive
Nucleotide Protein
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