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TMEM108 transmembrane protein 108 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717579, updated on 17-Aug-2024

Summary

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Official Symbol
TMEM108provided by VGNC
Official Full Name
transmembrane protein 108provided by VGNC
Primary source
VGNC:VGNC:79714
Locus tag
EGK_12099
See related
Ensembl:ENSMMUG00000019854
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TMEM108 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (35299359..35639321)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (168570065..168909134, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997116 Neighboring gene 60S ribosomal protein L19 pseudogene Neighboring gene uncharacterized LOC114676243 Neighboring gene beaded filament structural protein 2 Neighboring gene uncharacterized LOC106997114

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in dendrite extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postsynaptic density organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde axonal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 108

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001265634.1 → NP_001252563.1  transmembrane protein 108 precursor

    See identical proteins and their annotated locations for NP_001252563.1

    Status: PROVISIONAL

    Source sequence(s)
    JV565169
    UniProtKB/TrEMBL
    A0A5F8ATQ1, A0A8J8Y7R7, F7GTM0, G7MJR8
    Related
    ENSMMUP00000026108.4, ENSMMUT00000027905.4
    Conserved Domains (1) summary
    pfam15759
    Location:63 → 575
    TMEM108; TMEM108 family

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    35299359..35639321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015132066.2 → XP_014987552.1  transmembrane protein 108 isoform X1

    UniProtKB/TrEMBL
    A0A5F8ATQ1, A0A8J8Y7R7, F7GTM0, G7MJR8
    Related
    ENSMMUP00000080794.1, ENSMMUT00000086653.1
    Conserved Domains (1) summary
    pfam15759
    Location:63 → 575
    TMEM108; TMEM108 family

  2. XM_028843439.1 → XP_028699272.1  transmembrane protein 108 isoform X1

    UniProtKB/TrEMBL
    A0A5F8ATQ1, A0A8J8Y7R7, F7GTM0, G7MJR8
    Conserved Domains (1) summary
    pfam15759
    Location:63 → 575
    TMEM108; TMEM108 family

  3. XM_028843436.1 → XP_028699269.1  transmembrane protein 108 isoform X1

    UniProtKB/TrEMBL
    A0A5F8ATQ1, A0A8J8Y7R7, F7GTM0, G7MJR8
    Conserved Domains (1) summary
    pfam15759
    Location:63 → 575
    TMEM108; TMEM108 family

  4. XM_028843438.1 → XP_028699271.1  transmembrane protein 108 isoform X1

    UniProtKB/TrEMBL
    A0A5F8ATQ1, A0A8J8Y7R7, F7GTM0, G7MJR8
    Conserved Domains (1) summary
    pfam15759
    Location:63 → 575
    TMEM108; TMEM108 family

  5. XM_028843440.1 → XP_028699273.1  transmembrane protein 108 isoform X1

    UniProtKB/TrEMBL
    A0A5F8ATQ1, A0A8J8Y7R7, F7GTM0, G7MJR8
    Conserved Domains (1) summary
    pfam15759
    Location:63 → 575
    TMEM108; TMEM108 family

  6. XM_028843437.1 → XP_028699270.1  transmembrane protein 108 isoform X1

    UniProtKB/TrEMBL
    A0A5F8ATQ1, A0A8J8Y7R7, F7GTM0, G7MJR8
    Conserved Domains (1) summary
    pfam15759
    Location:63 → 575
    TMEM108; TMEM108 family
Nucleotide Protein
Heading Accession and Version

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