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CBX2 chromobox 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717462, updated on 17-Aug-2024

Summary

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Official Symbol
CBX2provided by VGNC
Official Full Name
chromobox 2provided by VGNC
Primary source
VGNC:VGNC:99127
See related
Ensembl:ENSMMUG00000046417
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CBX2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (76103072..76112472)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (73631207..73641262)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 Neighboring gene uncharacterized LOC106994150 Neighboring gene chromobox 8 Neighboring gene chromobox 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PRC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of heterochromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromobox protein homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    76103072..76112472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015120495.2 → XP_014975981.2  chromobox protein homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q3K3, I0FVS0
    Related
    ENSMMUP00000042615.2, ENSMMUT00000074157.2
    Conserved Domains (2) summary
    pfam17218
    Location:489 → 521
    CBX7_C; CBX family C-terminal motif
    cd18647
    Location:9 → 61
    CD_Cbx2; chromodomain of chromobox homolog 2

  2. XM_028836879.1 → XP_028692712.1  chromobox protein homolog 2 isoform X2

    UniProtKB/TrEMBL
    F7FLI7
    Conserved Domains (1) summary
    pfam17218
    Location:396 → 428
    CBX7_C; CBX family C-terminal motif
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials