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SRSF4 serine and arginine rich splicing factor 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717401, updated on 17-Aug-2024

Summary

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Official Symbol
SRSF4provided by VGNC
Official Full Name
serine and arginine rich splicing factor 4provided by VGNC
Primary source
VGNC:VGNC:100150
See related
Ensembl:ENSMMUG00000007110
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
SFRS4
Orthologs
human mouse all
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Genomic context

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See SRSF4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (195501442..195534399)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (28135912..28168810, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type U Neighboring gene mitochondrial trans-2-enoyl-CoA reductase Neighboring gene basic salivary proline-rich protein 2-like Neighboring gene transmembrane protein 200B Neighboring gene erythrocyte membrane protein band 4.1 Neighboring gene 60S ribosomal protein L27 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/arginine-rich splicing factor 4
Names
splicing factor, arginine/serine-rich 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001260878.1 → NP_001247807.1  serine/arginine-rich splicing factor 4

    See identical proteins and their annotated locations for NP_001247807.1

    Status: PROVISIONAL

    Source sequence(s)
    JU470841
    UniProtKB/TrEMBL
    H9ET83
    Related
    ENSMMUP00000074297.1, ENSMMUT00000092894.1
    Conserved Domains (2) summary
    cd12600
    Location:104 → 175
    RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cl17169
    Location:1 → 87
    RRM_SF; RNA recognition motif (RRM) superfamily

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    195501442..195534399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028845802.1 → XP_028701635.1  serine/arginine-rich splicing factor 4 isoform X1

    UniProtKB/TrEMBL
    F7DYE3
    Conserved Domains (2) summary
    cd12600
    Location:94 → 165
    RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cl17169
    Location:27 → 77
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_028845799.1 → XP_028701632.1  serine/arginine-rich splicing factor 4 isoform X1

    UniProtKB/TrEMBL
    F7DYE3
    Related
    ENSMMUP00000009316.2, ENSMMUT00000009922.3
    Conserved Domains (2) summary
    cd12600
    Location:94 → 165
    RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cl17169
    Location:27 → 77
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version

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