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TCHH trichohyalin [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717358, updated on 17-Aug-2024

Summary

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Official Symbol
TCHHprovided by VGNC
Official Full Name
trichohyalinprovided by VGNC
Primary source
VGNC:VGNC:106515
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TCHH in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (98932890..98942203)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (126674565..126682830, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene repetin Neighboring gene pseudouridine-5'-phosphatase-like Neighboring gene trichohyalin like 1 Neighboring gene high mobility group protein B3 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transition metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: trichohyalin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    98932890..98942203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028828852.1 → XP_028684685.1  LOW QUALITY PROTEIN: trichohyalin

    Conserved Domains (3) summary
    PTZ00121
    Location:1147 → 1791
    PTZ00121; MAEBL; Provisional
    cd00213
    Location:2 → 89
    S-100; S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are ...
    pfam13868
    Location:1529 → 1815
    TPH; Trichohyalin-plectin-homology domain
Nucleotide Protein
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