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DKAM_RS00385 radical SAM protein [ Desulfurococcus amylolyticus 1221n ]

Gene ID: 7171693, updated on 29-Sep-2023

Summary

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Gene symbol
DKAM_RS00385
Gene description
radical SAM protein
Locus tag
DKAM_RS00385
Gene type
protein coding
Organism
Desulfurococcus amylolyticus 1221n (strain: 1221n, type-material: type strain of Desulfurococcus kamchatkensis)
Lineage
Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus
Old locus tag
DKAM_0076
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Genomic context

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Sequence:
NC_011766.1 (68092..69015)

NC_011766.1Genomic Context describing neighboring genes Neighboring gene lipoate protein ligase C-terminal domain-containing protein Neighboring gene biotin/lipoate A/B protein ligase family protein Neighboring gene biotin synthase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011766.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis. Ravin NV, et al. J Bacteriol, 2009 Apr. PMID 19114480, Free PMC Article
  2. Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to catalyze in vitro sulfatase post-translational modification. Benjdia A, et al. J Am Chem Soc, 2007 Mar 28. PMID 17335281
  3. A new type of bacterial sulfatase reveals a novel maturation pathway in prokaryotes. Berteau O, et al. J Biol Chem, 2006 Aug 11. PMID 16766528
  4. Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods. Sofia HJ, et al. Nucleic Acids Res, 2001 Mar 1. PMID 11222759, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
radical SAM protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011766.1 Reference assembly

    Range
    68092..69015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_048058730.1 radical SAM protein [Desulfurococcus amylolyticus]

    UniProtKB/TrEMBL
    B8D3D6
    Conserved Domains (1) summary
    COG2516
    Location:1 → 296
    COG2516; Biotin synthase-related protein, radical SAM superfamily [General function prediction only]