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PRRT1 proline rich transmembrane protein 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717111, updated on 17-Aug-2024

Summary

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Official Symbol
PRRT1provided by VGNC
Official Full Name
proline rich transmembrane protein 1provided by VGNC
Primary source
VGNC:VGNC:83449
See related
Ensembl:ENSMMUG00000016647
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PRRT1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (137351675..137357318)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (32992459..32995683, complement)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 5 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 1 Neighboring gene EGF like domain multiple 8 Neighboring gene palmitoyl-protein thioesterase 2 Neighboring gene FKBP prolyl isomerase like Neighboring gene activating transcription factor 6 beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proline-rich transmembrane protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257898.1 → NP_001244827.1  proline-rich transmembrane protein 1

    See identical proteins and their annotated locations for NP_001244827.1

    Status: PROVISIONAL

    Source sequence(s)
    JU320735
    UniProtKB/TrEMBL
    F6TP18, F6UY02, H9EQ32
    Related
    ENSMMUP00000021891.4, ENSMMUT00000023395.4
    Conserved Domains (1) summary
    pfam04505
    Location:219 → 286
    CD225; Interferon-induced transmembrane protein

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    137351675..137357318
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028846852.1 → XP_028702685.1  proline-rich transmembrane protein 1 isoform X1

    UniProtKB/TrEMBL
    F6TP18, F6UY02, H9EQ32
    Related
    ENSMMUP00000033998.3, ENSMMUT00000040970.3
    Conserved Domains (1) summary
    pfam04505
    Location:219 → 286
    CD225; Interferon-induced transmembrane protein
Nucleotide Protein
Heading Accession and Version

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