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STRN3 striatin 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717081, updated on 17-Aug-2024

Summary

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Official Symbol
STRN3provided by VGNC
Official Full Name
striatin 3provided by VGNC
Primary source
VGNC:VGNC:78127
See related
Ensembl:ENSMMUG00000011515
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See STRN3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (92980747..93114897, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (92281058..92420873, complement)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L27 pseudogene Neighboring gene uncharacterized LOC114679546 Neighboring gene cochlin Neighboring gene HIG1 domain family member 1A, mitochondrial pseudogene Neighboring gene intraflagellar transport protein 20 homolog pseudogene Neighboring gene microRNA mir-624 Neighboring gene adaptor related protein complex 4 subunit sigma 1 Neighboring gene HECT domain E3 ubiquitin protein ligase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene asparagine--tRNA ligase, cytoplasmic pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables armadillo repeat domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase 2A binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-containing complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
striatin-3
Names
nuclear autoantigen
striatin, calmodulin binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    92980747..93114897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015143492.2 → XP_014998978.1  striatin-3 isoform X4

    UniProtKB/TrEMBL
    F7C5N3, H9F9P2
    Related
    ENSMMUP00000015119.3, ENSMMUT00000016132.4
    Conserved Domains (4) summary
    COG2319
    Location:382 → 711
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:391 → 712
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam08232
    Location:64 → 190
    Striatin; Striatin family
    sd00039
    Location:401 → 447
    7WD40; WD40 repeat [structural motif]

  2. XM_015143490.2 → XP_014998976.1  striatin-3 isoform X2

    UniProtKB/TrEMBL
    A0A1D5Q8D3, G7MXE5
    Related
    ENSMMUP00000044301.2, ENSMMUT00000066246.2
    Conserved Domains (4) summary
    COG2319
    Location:429 → 758
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:438 → 759
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam08232
    Location:64 → 190
    Striatin; Striatin family
    sd00039
    Location:448 → 494
    7WD40; WD40 repeat [structural motif]

  3. XM_015143491.2 → XP_014998977.1  striatin-3 isoform X3

    UniProtKB/TrEMBL
    F7C5Q4, H9F9P2
    Related
    ENSMMUP00000015115.4, ENSMMUT00000016128.4
    Conserved Domains (4) summary
    COG2319
    Location:323 → 748
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:428 → 749
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam08232
    Location:64 → 190
    Striatin; Striatin family
    sd00039
    Location:438 → 484
    7WD40; WD40 repeat [structural motif]

  4. XM_015143489.2 → XP_014998975.1  striatin-3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QRZ9, G7MXE5
    Related
    ENSMMUP00000050827.2, ENSMMUT00000076704.2
    Conserved Domains (4) summary
    COG2319
    Location:466 → 795
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:475 → 796
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam08232
    Location:64 → 190
    Striatin; Striatin family
    sd00039
    Location:485 → 531
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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