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TTC28 tetratricopeptide repeat domain 28 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717025, updated on 17-Aug-2024

Summary

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Official Symbol
TTC28provided by VGNC
Official Full Name
tetratricopeptide repeat domain 28provided by VGNC
Primary source
VGNC:VGNC:79785
See related
Ensembl:ENSMMUG00000001058
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TTC28 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (22867501..23587419)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (69764737..70532679, complement)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 117 Neighboring gene HscB mitochondrial iron-sulfur cluster cochaperone Neighboring gene checkpoint kinase 2 Neighboring gene uncharacterized LOC114670379 Neighboring gene phosphatidylinositol transfer protein beta Neighboring gene MN1 proto-oncogene, transcriptional regulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 28
XP_015005463.1
XP_028683732.1
XP_028683733.1
XP_028683734.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    22867501..23587419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028827899.1 → XP_028683732.1  tetratricopeptide repeat protein 28 isoform X1

    UniProtKB/TrEMBL
    G7N3I0
    Conserved Domains (5) summary
    TIGR02917
    Location:47 → 969
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:91 → 121
    TPR; TPR repeat [structural motif]
    pfam05109
    Location:2120 → 2368
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12770
    Location:1422 → 1745
    CHAT; CHAT domain
    pfam13424
    Location:989 → 1061
    TPR_12; Tetratricopeptide repeat

  2. XM_028827900.1 → XP_028683733.1  tetratricopeptide repeat protein 28 isoform X2

    UniProtKB/TrEMBL
    G7N3I0
    Conserved Domains (5) summary
    TIGR02917
    Location:47 → 969
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:91 → 121
    TPR; TPR repeat [structural motif]
    pfam05109
    Location:2112 → 2360
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12770
    Location:1422 → 1745
    CHAT; CHAT domain
    pfam13424
    Location:989 → 1061
    TPR_12; Tetratricopeptide repeat

  3. XM_015149977.2 → XP_015005463.1  tetratricopeptide repeat protein 28 isoform X3

    UniProtKB/TrEMBL
    F6QN66, G7N3I0
    Related
    ENSMMUP00000001417.2, ENSMMUT00000001506.4
    Conserved Domains (8) summary
    smart00028
    Location:394 → 426
    TPR; Tetratricopeptide repeats
    COG0457
    Location:694 → 995
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:91 → 121
    TPR; TPR repeat [structural motif]
    pfam11914
    Location:2197 → 2285
    DUF3432; Domain of unknown function (DUF3432)
    pfam12770
    Location:1390 → 1713
    CHAT; CHAT domain
    pfam13176
    Location:959 → 994
    TPR_7; Tetratricopeptide repeat
    pfam13414
    Location:94 → 157
    TPR_11; TPR repeat
    pfam13424
    Location:315 → 386
    TPR_12; Tetratricopeptide repeat

  4. XM_028827901.1 → XP_028683734.1  tetratricopeptide repeat protein 28 isoform X4

    UniProtKB/TrEMBL
    G7N3I0
    Related
    ENSMMUP00000071787.1, ENSMMUT00000086200.1
    Conserved Domains (5) summary
    COG0457
    Location:608 → 909
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:508 → 536
    TPR; TPR repeat [structural motif]
    pfam05109
    Location:2002 → 2250
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12770
    Location:1304 → 1627
    CHAT; CHAT domain
    pfam13424
    Location:271 → 340
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
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