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PTAFR platelet activating factor receptor [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716788, updated on 17-Aug-2024

Summary

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Official Symbol
PTAFRprovided by VGNC
Official Full Name
platelet activating factor receptorprovided by VGNC
Primary source
VGNC:VGNC:76461
Locus tag
EGK_00457
See related
Ensembl:ENSMMUG00000063261
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
PAFr; PAF-R
Orthologs
human mouse all
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Genomic context

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See PTAFR in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (196548757..196582163)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (27025682..27078128, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene ATP synthase inhibitory factor subunit 1 Neighboring gene 40S ribosomal protein S27-like Neighboring gene DnaJ heat shock protein family (Hsp40) member C8 Neighboring gene U7 small nuclear RNA Neighboring gene ADP-ribosylation factor-like protein 8B pseudogene Neighboring gene U7 small nuclear RNA Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled purinergic nucleotide receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables platelet activating factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
platelet-activating factor receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    196548757..196582163
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015132896.2 → XP_014988382.1  platelet-activating factor receptor

    UniProtKB/TrEMBL
    A0A5F7Z9T7, A0A8J8XNR4, F7HEP3
    Related
    ENSMMUP00000061389.1, ENSMMUT00000085412.1
    Conserved Domains (1) summary
    cd15147
    Location:16 → 304
    7tmA_PAFR; platelet-activating factor receptor, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P35366.1 GenPept UniProtKB/Swiss-Prot:P35366

Gene LinkOut

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