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C1H1orf43 chromosome 1 C1orf43 homolog [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716453, updated on 17-Aug-2024

Summary

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Official Symbol
C1H1orf43provided by VGNC
Official Full Name
chromosome 1 C1orf43 homologprovided by VGNC
Primary source
VGNC:VGNC:70442
Locus tag
EGK_01351
See related
Ensembl:ENSMMUG00000010808
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See C1H1orf43 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (96835089..96850454)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (128818546..128833145, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene HCLS1 associated protein X-1 Neighboring gene ubiquitin associated protein 2 like Neighboring gene small nucleolar RNA SNORA58 Neighboring gene cilia and flagella associated protein 141 Neighboring gene microRNA mir-190b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein C1orf43 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    96835089..96850454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028828709.1 → XP_028684542.1  uncharacterized protein C1orf43 homolog isoform X3

    Conserved Domains (1) summary
    pfam07406
    Location:1 → 153
    NICE-3; NICE-3 protein

  2. XM_015110674.2 → XP_014966160.1  uncharacterized protein C1orf43 homolog isoform X1

    UniProtKB/TrEMBL
    A0A1D5RI11, A0A663D5A4, A0A8J8XYZ2, F7GRW2, F7GRW5, G7MDT7, H9FSL5
    Related
    ENSMMUP00000014163.4, ENSMMUT00000015112.4
    Conserved Domains (1) summary
    pfam07406
    Location:6 → 188
    NICE-3; NICE-3 protein

  3. XM_015110681.2 → XP_014966167.1  uncharacterized protein C1orf43 homolog isoform X2

    UniProtKB/TrEMBL
    A0A1D5RI11, A0A5K1VKT7
    Related
    ENSMMUP00000014161.4, ENSMMUT00000015110.4
    Conserved Domains (1) summary
    pfam07406
    Location:6 → 170
    NICE-3; NICE-3 protein

  4. XM_015110691.2 → XP_014966177.1  uncharacterized protein C1orf43 homolog isoform X3

    Conserved Domains (1) summary
    pfam07406
    Location:1 → 153
    NICE-3; NICE-3 protein

  5. XM_028828715.1 → XP_028684548.1  uncharacterized protein C1orf43 homolog isoform X4

    Conserved Domains (1) summary
    pfam07406
    Location:1 → 134
    NICE-3; NICE-3 protein
Nucleotide Protein
Heading Accession and Version

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