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SEC22C SEC22 homolog C, vesicle trafficking protein [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716351, updated on 17-Aug-2024

Summary

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Official Symbol
SEC22Cprovided by VGNC
Official Full Name
SEC22 homolog C, vesicle trafficking proteinprovided by VGNC
Primary source
VGNC:VGNC:77252
See related
Ensembl:ENSMMUG00000021237
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SEC22C in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (98498036..98554282, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (100027994..100084006)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene lysozyme like 4 Neighboring gene vasoactive intestinal peptide receptor 1 Neighboring gene SS18 like 2 Neighboring gene natural killer cell triggering receptor Neighboring gene uncharacterized LOC114676332 Neighboring gene uncharacterized LOC106996947 Neighboring gene zinc finger and BTB domain containing 47

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicle-trafficking protein SEC22c
Names
SEC22 vesicle trafficking protein homolog C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001194677.2 → NP_001181606.1  vesicle-trafficking protein SEC22c

    See identical proteins and their annotated locations for NP_001181606.1

    Status: PROVISIONAL

    Source sequence(s)
    QNVO02000284
    UniProtKB/TrEMBL
    F7HTH3
    Related
    ENSMMUP00000027966.4, ENSMMUT00000029884.4
    Conserved Domains (1) summary
    pfam13774
    Location:38 → 99
    Longin; Regulated-SNARE-like domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    98498036..98554282 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015131178.2 → XP_014986664.1  vesicle-trafficking protein SEC22c isoform X1

    UniProtKB/TrEMBL
    F7HRR1
    Conserved Domains (1) summary
    pfam13774
    Location:38 → 99
    Longin; Regulated-SNARE-like domain

  2. XM_001115291.4 → XP_001115291.1  vesicle-trafficking protein SEC22c isoform X2

    See identical proteins and their annotated locations for XP_001115291.1

    UniProtKB/TrEMBL
    F7HTH3
    Conserved Domains (1) summary
    pfam13774
    Location:38 → 99
    Longin; Regulated-SNARE-like domain

  3. XM_001115380.4 → XP_001115380.1  vesicle-trafficking protein SEC22c isoform X1

    See identical proteins and their annotated locations for XP_001115380.1

    UniProtKB/TrEMBL
    F7HRR1
    Related
    ENSMMUP00000027967.2, ENSMMUT00000029885.4
    Conserved Domains (1) summary
    pfam13774
    Location:38 → 99
    Longin; Regulated-SNARE-like domain

  4. XM_028843410.1 → XP_028699243.1  vesicle-trafficking protein SEC22c isoform X3

    Conserved Domains (1) summary
    cd14824
    Location:5 → 121
    Longin; longin domain
Nucleotide Protein
Heading Accession and Version

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