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EFNB3 ephrin B3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716257, updated on 17-Aug-2024

Summary

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Official Symbol
EFNB3provided by VGNC
Official Full Name
ephrin B3provided by VGNC
Primary source
VGNC:VGNC:104599
Locus tag
EGK_08144
See related
Ensembl:ENSMMUG00000048204
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See EFNB3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (7488902..7495174)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (7691514..7698739)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene tumor protein p53 Neighboring gene WD repeat containing antisense to TP53 Neighboring gene dynein axonemal heavy chain 2 Neighboring gene lysine demethylase 6B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin-B3
Names
EPH-related receptor tyrosine kinase ligand 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    7488902..7495174
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015118523.2 → XP_014974009.1  ephrin-B3 isoform X2

    Conserved Domains (1) summary
    cl19115
    Location:31 → 168
    Cupredoxin; Cupredoxin superfamily

  2. XM_015118522.2 → XP_014974008.2  ephrin-B3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q3L1
    Related
    ENSMMUP00000042623.2, ENSMMUT00000074461.2
    Conserved Domains (1) summary
    cl19115
    Location:31 → 168
    Cupredoxin; Cupredoxin superfamily
Nucleotide Protein
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Gene LinkOut

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