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MINDY1 MINDY lysine 48 deubiquitinase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716225, updated on 17-Aug-2024

Summary

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Official Symbol
MINDY1provided by VGNC
Official Full Name
MINDY lysine 48 deubiquitinase 1provided by VGNC
Primary source
VGNC:VGNC:74828
Locus tag
EGK_01243
See related
Ensembl:ENSMMUG00000010067
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
FAM63A
Orthologs
human mouse all
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Genomic context

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See MINDY1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (100119185..100129857)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (125466236..125477188, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene chromosome 1 C1orf56 homolog Neighboring gene BCL2 interacting protein like Neighboring gene prune exopolyphosphatase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene annexin A9 Neighboring gene ceramide synthase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K48-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K48-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase MINDY-1
Names
family with sequence similarity 63 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    100119185..100129857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015151829.2 → XP_015007315.2  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X4

    UniProtKB/TrEMBL
    A0A5F8ADN5, G7MDI8
    Conserved Domains (1) summary
    pfam04424
    Location:141 → 258
    MINDY_DUB; MINDY deubiquitinase

  2. XM_028829207.1 → XP_028685040.1  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X1

    Conserved Domains (1) summary
    pfam04424
    Location:141 → 259
    MINDY_DUB; MINDY deubiquitinase

  3. XM_028829204.1 → XP_028685037.1  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X1

    Conserved Domains (1) summary
    pfam04424
    Location:141 → 259
    MINDY_DUB; MINDY deubiquitinase

  4. XM_028829213.1 → XP_028685046.1  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X2

    Conserved Domains (1) summary
    pfam04424
    Location:141 → 258
    MINDY_DUB; MINDY deubiquitinase

  5. XM_015151822.2 → XP_015007308.2  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X4

    UniProtKB/TrEMBL
    A0A5F8ADN5, G7MDI8
    Related
    ENSMMUP00000075982.1, ENSMMUT00000094464.1
    Conserved Domains (1) summary
    pfam04424
    Location:141 → 258
    MINDY_DUB; MINDY deubiquitinase

  6. XM_015151818.2 → XP_015007304.2  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X3

    UniProtKB/TrEMBL
    G7MDI8
    Conserved Domains (1) summary
    pfam04424
    Location:141 → 259
    MINDY_DUB; MINDY deubiquitinase

  7. XM_015151838.2 → XP_015007324.2  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X5

    UniProtKB/TrEMBL
    G7MDI8
    Conserved Domains (1) summary
    pfam04424
    Location:189 → 306
    MINDY_DUB; MINDY deubiquitinase
Nucleotide Protein
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