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HEXD hexosaminidase D [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716128, updated on 17-Aug-2024

Summary

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Official Symbol
HEXDprovided by VGNC
Official Full Name
hexosaminidase Dprovided by VGNC
Primary source
VGNC:VGNC:99158
See related
Ensembl:ENSMMUG00000019221
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
HEXDC
Orthologs
human mouse all
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Genomic context

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See HEXD in Genome Data Viewer
Location:
chromosome: 16
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (78770867..78798265)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (76305856..76332704)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene testis expressed 19 Neighboring gene urotensin 2 receptor Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3 Neighboring gene uncharacterized LOC106994162 Neighboring gene cytochrome b-245 chaperone 1 Neighboring gene nuclear prelamin A recognition factor Neighboring gene uncharacterized LOC106994164 Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hexosaminidase D
XP_028692865.1
XP_028692866.1
XP_028692867.1
XP_028692868.1
XP_028692869.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    78770867..78798265
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028837032.1 → XP_028692865.1  hexosaminidase D isoform X1

    UniProtKB/TrEMBL
    F6QNP6, F6QPB2
    Related
    ENSMMUP00000025260.3, ENSMMUT00000027001.4
    Conserved Domains (1) summary
    cd06565
    Location:9 → 323
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...

  2. XM_028837033.1 → XP_028692866.1  hexosaminidase D isoform X2

    UniProtKB/TrEMBL
    F6QPB2
    Conserved Domains (1) summary
    cd06565
    Location:9 → 268
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...

  3. XM_028837035.1 → XP_028692868.1  hexosaminidase D isoform X4

    UniProtKB/TrEMBL
    H9EYI1
    Conserved Domains (1) summary
    cd06565
    Location:9 → 323
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...

  4. XM_028837036.1 → XP_028692869.1  hexosaminidase D isoform X5

    Conserved Domains (1) summary
    cl02948
    Location:1 → 195
    GH20_hexosaminidase; Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. ...

  5. XM_028837034.1 → XP_028692867.1  hexosaminidase D isoform X3

    Conserved Domains (1) summary
    cl02948
    Location:90 → 263
    GH20_hexosaminidase; Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. ...
Nucleotide Protein
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