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PHYHIP phytanoyl-CoA 2-hydroxylase interacting protein [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715990, updated on 17-Aug-2024

Summary

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Official Symbol
PHYHIPprovided by VGNC
Official Full Name
phytanoyl-CoA 2-hydroxylase interacting proteinprovided by VGNC
Primary source
VGNC:VGNC:75812
Locus tag
EGK_18754
See related
Ensembl:ENSMMUG00000013032
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PHYHIP in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (22384418..22396739, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (22115772..22127968, complement)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene surfactant protein C Neighboring gene bone morphogenetic protein 1 Neighboring gene microRNA mir-320a Neighboring gene RNA polymerase III subunit D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phytanoyl-CoA hydroxylase-interacting protein
Names
Phytanoyl-CoA hydroxylase-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266549.1 → NP_001253478.1  phytanoyl-CoA hydroxylase-interacting protein

    See identical proteins and their annotated locations for NP_001253478.1

    Status: PROVISIONAL

    Source sequence(s)
    JU337332
    UniProtKB/TrEMBL
    A0A1D5Q8H0, A0A8J8XK55, F7HAA3, G7N0N2
    Related
    ENSMMUP00000071888.1, ENSMMUT00000100610.1
    Conserved Domains (1) summary
    cd00063
    Location:5 → 112
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    22384418..22396739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028852270.1 → XP_028708103.1  phytanoyl-CoA hydroxylase-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q8H0, A0A8J8XK55, F7HAA3, G7N0N2
    Conserved Domains (1) summary
    cd00063
    Location:5 → 112
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_028852271.1 → XP_028708104.1  phytanoyl-CoA hydroxylase-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q8H0, A0A8J8XK55, F7HAA3, G7N0N2
    Conserved Domains (1) summary
    cd00063
    Location:5 → 112
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  3. XM_015144900.2 → XP_015000386.1  phytanoyl-CoA hydroxylase-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q8H0, A0A8J8XK55, F7HAA3, G7N0N2
    Related
    ENSMMUP00000017114.2, ENSMMUT00000018283.4
    Conserved Domains (1) summary
    cd00063
    Location:5 → 112
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
Heading Accession and Version

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