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NOP9 NOP9 nucleolar protein [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715969, updated on 17-Aug-2024

Summary

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Official Symbol
NOP9provided by VGNC
Official Full Name
NOP9 nucleolar proteinprovided by VGNC
Primary source
VGNC:VGNC:75216
Locus tag
EGK_18065
See related
Ensembl:ENSMMUG00000010049
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
C7H14orf21
Orthologs
human mouse all
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Genomic context

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See NOP9 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (86389068..86394485)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (85713038..85722319)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene Rab geranylgeranyltransferase subunit alpha Neighboring gene dehydrogenase/reductase 1 Neighboring gene cell death inducing DFFA like effector b Neighboring gene leukotriene B4 receptor 2 Neighboring gene leukotriene B4 receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, small subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar protein 9
Names
NOP9 nucleolar protein homolog
pumilio domain-containing protein C14orf21

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266256.1 → NP_001253185.1  nucleolar protein 9

    See identical proteins and their annotated locations for NP_001253185.1

    Status: PROVISIONAL

    Source sequence(s)
    JU474487
    UniProtKB/TrEMBL
    A0A8J8Y461, F6TFH6, G7MXC4
    Related
    ENSMMUP00000013138.2, ENSMMUT00000014029.4
    Conserved Domains (1) summary
    cl21719
    Location:538 → 601
    Pumilio; Pumilio-family RNA binding domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    86389068..86394485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015143357.2 → XP_014998843.1  nucleolar protein 9 isoform X1

    Conserved Domains (1) summary
    cl21719
    Location:552 → 615
    Pumilio; Pumilio-family RNA binding domain

  2. XM_015143358.2 → XP_014998844.1  nucleolar protein 9 isoform X2

    Conserved Domains (1) summary
    cl21719
    Location:387 → 450
    Pumilio; Pumilio-family RNA binding domain
Nucleotide Protein
Heading Accession and Version

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