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GTF2A1L general transcription factor IIA subunit 1 like [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715957, updated on 5-Mar-2024

Summary

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Gene symbol
GTF2A1L
Gene description
general transcription factor IIA subunit 1 like
See related
Ensembl:ENSMMUG00000030838
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
SALF; STON1-GTF2A1L
Annotation information
Note: XM_002808036.1 is predicted based on the human STON1-GTF2A1L readthrough (GeneID:286749) which is unsupported in macaque. However, due to macaque Build 1.2 genome discrepancies, the individual STON1 and GTF2A1L genes can't be represented. [17 Jun 2014]
Orthologs
human mouse all
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Genomic context

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See GTF2A1L in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (60074077..60135250, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (49449193..49510381)

Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106992943 Neighboring gene luteinizing hormone/choriogonadotropin receptor Neighboring gene serine/arginine-rich splicing factor 10 pseudogene Neighboring gene uncharacterized LOC114671711 Neighboring gene stonin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TFIIA-alpha and beta-like factor
Names
stonin-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041766.1 Reference Mmul_10 Primary Assembly

    Range
    60074077..60135250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028831686.1 → XP_028687519.1  TFIIA-alpha and beta-like factor isoform X2

    UniProtKB/TrEMBL
    A0A1D5R1N8, F7FZJ9
    Related
    ENSMMUP00000054222.1, ENSMMUT00000055526.2
    Conserved Domains (1) summary
    pfam03153
    Location:8 → 444
    TFIIA; Transcription factor IIA, alpha/beta subunit

  2. XM_015112323.2 → XP_014967809.1  TFIIA-alpha and beta-like factor isoform X1

    UniProtKB/TrEMBL
    A0A1D5QZ69, F7FZJ9
    Related
    ENSMMUP00000053351.1, ENSMMUT00000074414.2
    Conserved Domains (1) summary
    pfam03153
    Location:10 → 478
    TFIIA; Transcription factor IIA, alpha/beta subunit
Nucleotide Protein
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