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SBF1 SET binding factor 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715955, updated on 17-Aug-2024

Summary

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Official Symbol
SBF1provided by VGNC
Official Full Name
SET binding factor 1provided by VGNC
Primary source
VGNC:VGNC:98440
See related
Ensembl:ENSMMUG00000009082
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SBF1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
45
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (990363..1044163)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (92469950..92496343, complement)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene thymidine phosphorylase Neighboring gene non-SMC condensin II complex subunit H2 Neighboring gene lipase maturation factor 2 Neighboring gene myo-inositol oxygenase Neighboring gene adrenomedullin 2 Neighboring gene protein phosphatase 6 regulatory subunit 2 Neighboring gene DENN domain containing 6B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
myotubularin-related protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    990363..1044163
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028827515.1 → XP_028683348.1  myotubularin-related protein 5 isoform X1

    UniProtKB/TrEMBL
    G7N4E7
    Conserved Domains (8) summary
    smart00801
    Location:526 → 594
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:283 → 472
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:159 → 239
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    PHA03247
    Location:34 → 156
    PHA03247; large tegument protein UL36; Provisional
    cd01235
    Location:1948 → 2053
    PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
    pfam12335
    Location:705 → 926
    SBF2; Myotubularin protein
    cl17171
    Location:1055 → 1173
    PH-like; Pleckstrin homology-like domain
    cl28904
    Location:1312 → 1684
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  2. XM_028827517.1 → XP_028683350.1  myotubularin-related protein 5 isoform X3

    UniProtKB/TrEMBL
    G7N4E7
    Conserved Domains (8) summary
    smart00801
    Location:526 → 594
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:283 → 472
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:159 → 239
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    PHA03247
    Location:34 → 156
    PHA03247; large tegument protein UL36; Provisional
    cd01235
    Location:1922 → 2027
    PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
    pfam12335
    Location:705 → 926
    SBF2; Myotubularin protein
    cl17171
    Location:1055 → 1173
    PH-like; Pleckstrin homology-like domain
    cl28904
    Location:1312 → 1658
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  3. XM_028827516.1 → XP_028683349.1  myotubularin-related protein 5 isoform X2

    UniProtKB/TrEMBL
    G7N4E7
    Conserved Domains (8) summary
    smart00801
    Location:517 → 585
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:282 → 463
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:159 → 239
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    PHA03247
    Location:34 → 156
    PHA03247; large tegument protein UL36; Provisional
    cd01235
    Location:1939 → 2044
    PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
    pfam12335
    Location:696 → 917
    SBF2; Myotubularin protein
    cl17171
    Location:1046 → 1164
    PH-like; Pleckstrin homology-like domain
    cl28904
    Location:1303 → 1675
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  4. XM_028827518.1 → XP_028683351.1  myotubularin-related protein 5 isoform X5

    UniProtKB/TrEMBL
    G7N4E7
    Conserved Domains (7) summary
    smart00801
    Location:365 → 433
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:130 → 311
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:1 → 86
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    cd01235
    Location:1761 → 1866
    PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
    cd14588
    Location:1151 → 1497
    PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5
    pfam12335
    Location:544 → 765
    SBF2; Myotubularin protein
    cl17171
    Location:894 → 1012
    PH-like; Pleckstrin homology-like domain

  5. XM_015150656.2 → XP_015006142.2  myotubularin-related protein 5 isoform X4

    UniProtKB/TrEMBL
    G7N4E7, H9FY86
    Related
    ENSMMUP00000010544.4, ENSMMUT00000011249.4
    Conserved Domains (7) summary
    smart00801
    Location:364 → 432
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:129 → 310
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:1 → 86
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    cd01235
    Location:1786 → 1891
    PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
    pfam12335
    Location:543 → 764
    SBF2; Myotubularin protein
    cl17171
    Location:893 → 1011
    PH-like; Pleckstrin homology-like domain
    cl28904
    Location:1150 → 1522
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  6. XM_015150658.2 → XP_015006144.2  myotubularin-related protein 5 isoform X6

    UniProtKB/TrEMBL
    G7N4E7
    Related
    ENSMMUP00000011923.4, ENSMMUT00000012714.4
    Conserved Domains (7) summary
    smart00801
    Location:364 → 432
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:129 → 310
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:1 → 86
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    cd01235
    Location:1760 → 1865
    PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
    pfam12335
    Location:543 → 764
    SBF2; Myotubularin protein
    cd14588
    Location:1150 → 1496
    PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5
    cl17171
    Location:893 → 1011
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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