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TSFM Ts translation elongation factor, mitochondrial [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715916, updated on 17-Aug-2024

Summary

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Official Symbol
TSFMprovided by VGNC
Official Full Name
Ts translation elongation factor, mitochondrialprovided by VGNC
Primary source
VGNC:VGNC:78660
See related
Ensembl:ENSMMUG00000005893
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TSFM in Genome Data Viewer
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (57368849..57394509)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (56589153..56614897)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 27 subfamily B member 1 Neighboring gene EEF1A lysine methyltransferase 3 Neighboring gene methyltransferase 1, tRNA methylguanosine Neighboring gene U6 spliceosomal RNA Neighboring gene advillin Neighboring gene uncharacterized LOC114670873 Neighboring gene CTD small phosphatase 2 Neighboring gene microRNA mir-26a-2 Neighboring gene gem (nuclear organelle) associated protein 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor Ts, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    57368849..57394509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015152146.2 → XP_015007632.1  elongation factor Ts, mitochondrial isoform X2

    Conserved Domains (2) summary
    cd14275
    Location:48 → 84
    UBA_EF-Ts; UBA domain found in elongation factor Ts (EF-Ts) from bacteria, chloroplasts and mitochondria of eukaryotes
    pfam00889
    Location:117 → 142
    EF_TS; Elongation factor TS

  2. XM_015152147.2 → XP_015007633.1  elongation factor Ts, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A1D5QPH6
    Conserved Domains (1) summary
    cl27004
    Location:48 → 142
    EF_TS; Elongation factor TS

  3. XM_001116504.4 → XP_001116504.3  elongation factor Ts, mitochondrial isoform X1

    UniProtKB/TrEMBL
    F7HSY3, H9F3S8
    Related
    ENSMMUP00000039298.2, ENSMMUT00000046256.3
    Conserved Domains (1) summary
    PRK09377
    Location:48 → 313
    tsf; elongation factor Ts; Provisional
Nucleotide Protein
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