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SYTL1 synaptotagmin like 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715833, updated on 17-Aug-2024

Summary

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Official Symbol
SYTL1provided by VGNC
Official Full Name
synaptotagmin like 1provided by VGNC
Primary source
VGNC:VGNC:78122
See related
Ensembl:ENSMMUG00000004768
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SYTL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (197381209..197393101, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (26207271..26219016)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene CD164 molecule like 2 Neighboring gene ficolin 3 Neighboring gene mitogen-activated protein kinase kinase kinase 6 Neighboring gene actin, muscle-like Neighboring gene transmembrane protein 222 Neighboring gene U6 spliceosomal RNA Neighboring gene WD and tetratricopeptide repeats 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurexin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in exocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    197381209..197393101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001110913.4 → XP_001110913.2  synaptotagmin-like protein 1 isoform X2

    UniProtKB/TrEMBL
    F6SM46, F7GMC4, H9Z353
    Related
    ENSMMUP00000040481.3, ENSMMUT00000047447.3
    Conserved Domains (4) summary
    cd04020
    Location:399 → 555
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:267 → 386
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    PHA03169
    Location:114 → 234
    PHA03169; hypothetical protein; Provisional
    pfam02318
    Location:35 → 99
    FYVE_2; FYVE-type zinc finger

  2. XM_015132627.2 → XP_014988113.2  synaptotagmin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    F7GMC0, H9Z353
    Related
    ENSMMUP00000040483.3, ENSMMUT00000047449.3
    Conserved Domains (4) summary
    cd04020
    Location:450 → 606
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:318 → 437
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    PHA03169
    Location:62 → 285
    PHA03169; hypothetical protein; Provisional
    pfam02318
    Location:35 → 99
    FYVE_2; FYVE-type zinc finger

  3. XM_028837416.1 → XP_028693249.1  synaptotagmin-like protein 1 isoform X3

    UniProtKB/TrEMBL
    H9Z353
    Conserved Domains (3) summary
    cd04020
    Location:391 → 547
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:259 → 378
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    PHA03169
    Location:56 → 226
    PHA03169; hypothetical protein; Provisional

RNA

  1. XR_001443342.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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