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HIGD1B HIG1 hypoxia inducible domain family member 1B [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715566, updated on 17-Aug-2024

Summary

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Official Symbol
HIGD1Bprovided by VGNC
Official Full Name
HIG1 hypoxia inducible domain family member 1Bprovided by VGNC
Primary source
VGNC:VGNC:104616
Locus tag
EGK_08815
See related
Ensembl:ENSMMUG00000054498
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See HIGD1B in Genome Data Viewer
Location:
chromosome: 16
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (56116010..56119170)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (50736904..50740321)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 11 Neighboring gene gap junction protein gamma 1 Neighboring gene elongation factor Tu GTP binding domain containing 2 Neighboring gene coiled-coil domain containing 103 Neighboring gene family with sequence similarity 187 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial respirasome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
HIG1 domain family member 1B
Names
HIG1 domain family, member 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    56116010..56119170
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028836607.1 → XP_028692440.1  HIG1 domain family member 1B isoform X2

    UniProtKB/TrEMBL
    A0A5F8AED6, A0A8J8YHD0, F6ZP04, H9EXS1
    Related
    ENSMMUP00000075747.1, ENSMMUT00000099711.1
    Conserved Domains (1) summary
    pfam04588
    Location:29 → 79
    HIG_1_N; Hypoxia induced protein conserved region

  2. XM_015119890.2 → XP_014975376.1  HIG1 domain family member 1B isoform X2

    UniProtKB/TrEMBL
    A0A5F8AED6, A0A8J8YHD0, F6ZP04, H9EXS1
    Conserved Domains (1) summary
    pfam04588
    Location:29 → 79
    HIG_1_N; Hypoxia induced protein conserved region

  3. XM_015119891.2 → XP_014975377.1  HIG1 domain family member 1B isoform X2

    UniProtKB/TrEMBL
    A0A5F8AED6, A0A8J8YHD0, F6ZP04, H9EXS1
    Conserved Domains (1) summary
    pfam04588
    Location:29 → 79
    HIG_1_N; Hypoxia induced protein conserved region

  4. XM_028836606.1 → XP_028692439.1  HIG1 domain family member 1B isoform X1

    Conserved Domains (1) summary
    pfam04588
    Location:36 → 81
    HIG_1_N; Hypoxia induced protein conserved region

RNA

  1. XR_003723817.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials