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LRRC45 leucine rich repeat containing 45 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715420, updated on 17-Aug-2024

Summary

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Official Symbol
LRRC45provided by VGNC
Official Full Name
leucine rich repeat containing 45provided by VGNC
Primary source
VGNC:VGNC:82178
See related
Ensembl:ENSMMUG00000010892
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LRRC45 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (78332560..78340419)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (75864341..75872202)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene ASPSCR1 tether for SLC2A4, UBX domain containing Neighboring gene centromere protein X Neighboring gene microRNA mir-7165 Neighboring gene Rac family small GTPase 3 Neighboring gene dicarbonyl and L-xylulose reductase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    78332560..78340419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001112894.4 → XP_001112894.2  leucine-rich repeat-containing protein 45 isoform X1

    UniProtKB/TrEMBL
    F7FSL4, H9FR08
    Related
    ENSMMUP00000014293.4, ENSMMUT00000015251.4
    Conserved Domains (3) summary
    sd00033
    Location:61 → 84
    LRR_RI; leucine-rich repeat [structural motif]
    pfam17380
    Location:233 → 640
    DUF5401; Family of unknown function (DUF5401)
    cl29113
    Location:34 → 224
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  2. XM_015120612.2 → XP_014976098.2  leucine-rich repeat-containing protein 45 isoform X2

    UniProtKB/TrEMBL
    A0A5F8A5B5, H9FR08
    Related
    ENSMMUP00000072100.1, ENSMMUT00000100789.1
    Conserved Domains (3) summary
    sd00033
    Location:61 → 84
    LRR_RI; leucine-rich repeat [structural motif]
    pfam17380
    Location:190 → 564
    DUF5401; Family of unknown function (DUF5401)
    cl29113
    Location:28 → 178
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
Nucleotide Protein
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