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B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715317, updated on 17-Aug-2024

Summary

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Official Symbol
B4GALNT1provided by VGNC
Official Full Name
beta-1,4-N-acetyl-galactosaminyltransferase 1provided by VGNC
Primary source
VGNC:VGNC:70164
Locus tag
EGK_03848
See related
Ensembl:ENSMMUG00000001182
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See B4GALNT1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (57200642..57210300, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (56423108..56430513, complement)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000898 Neighboring gene deltex E3 ubiquitin ligase 3 Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene solute carrier family 26 member 10 Neighboring gene nucleolar protein 56-like Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 1
Names
Beta-1,4 N-acetylgalactosaminyltransferase 1
XP_001116263.2
XP_001116271.1
XP_015007617.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    57200642..57210300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001116271.4 → XP_001116271.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_001116271.1

    UniProtKB/TrEMBL
    A0A5S6R739, A0A8J8Y994, F6R9K4, G7N7G9, H9F7B6
    Conserved Domains (1) summary
    pfam00535
    Location:280 → 429
    Glycos_transf_2; Glycosyl transferase family 2

  2. XM_015152131.2 → XP_015007617.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A5S6R739, A0A8J8Y994, F6R9K4, G7N7G9, H9F7B6
    Related
    ENSMMUP00000001579.4, ENSMMUT00000001675.4
    Conserved Domains (1) summary
    pfam00535
    Location:280 → 429
    Glycos_transf_2; Glycosyl transferase family 2

  3. XM_001116263.4 → XP_001116263.2  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZP74, H9F7B6
    Related
    ENSMMUP00000067419.1, ENSMMUT00000109056.1
    Conserved Domains (2) summary
    COG0463
    Location:355 → 453
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam00535
    Location:357 → 506
    Glycos_transf_2; Glycosyl transferase family 2
Nucleotide Protein
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