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DDIT4 DNA damage inducible transcript 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715307, updated on 5-Mar-2024

Summary

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Gene symbol
DDIT4
Gene description
DNA damage inducible transcript 4
Locus tag
EGK_19745
See related
Ensembl:ENSMMUG00000055226
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See DDIT4 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (65504516..65506615, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (60096563..60098665, complement)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene mitochondrial calcium uptake 1 Neighboring gene U6 spliceosomal RNA Neighboring gene DnaJ heat shock protein family (Hsp40) member B12 Neighboring gene anaphase promoting complex subunit 16 Neighboring gene 60S ribosomal protein L15 pseudogene Neighboring gene uncharacterized LOC114669973 Neighboring gene activating signal cointegrator 1 complex subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 14-3-3 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TOR signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA damage-inducible transcript 4 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257796.1 → NP_001244725.1  DNA damage-inducible transcript 4 protein

    See identical proteins and their annotated locations for NP_001244725.1

    Status: PROVISIONAL

    Source sequence(s)
    JU335091
    UniProtKB/TrEMBL
    A0A8J8XRK8, F7DLT7, G7N274, H9ZAD1
    Related
    ENSMMUP00000072895.1, ENSMMUT00000083713.1
    Conserved Domains (1) summary
    pfam07809
    Location:105 → 224
    RTP801_C; RTP801 C-terminal region

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    65504516..65506615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015147370.2 → XP_015002856.1  DNA damage-inducible transcript 4 protein isoform X1

    UniProtKB/TrEMBL
    A0A8J8XRK8, F7DLT7, G7N274, H9ZAD1
    Conserved Domains (1) summary
    pfam07809
    Location:105 → 224
    RTP801_C; RTP801 C-terminal region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials