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SLC35C1 solute carrier family 35 member C1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715064, updated on 17-Aug-2024

Summary

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Official Symbol
SLC35C1provided by VGNC
Official Full Name
solute carrier family 35 member C1provided by VGNC
Primary source
VGNC:VGNC:77524
Locus tag
EGK_06320
See related
Ensembl:ENSMMUG00000002452
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SLC35C1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (19963422..19971880, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (20243144..20253024, complement)

Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 8 interacting protein 1 Neighboring gene Frey regulator of sperm-oocyte fusion 1 Neighboring gene cryptochrome circadian regulator 2 Neighboring gene uncharacterized LOC106993241 Neighboring gene uncharacterized LOC114672268

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-fucose import into Golgi lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001258150.1 → NP_001245079.1  GDP-fucose transporter 1

    See identical proteins and their annotated locations for NP_001245079.1

    Status: PROVISIONAL

    Source sequence(s)
    JU476279
    UniProtKB/TrEMBL
    A0A8J8Y415, F7HH07, G7NDI1, H9EWX0
    Related
    ENSMMUP00000065546.1, ENSMMUT00000097643.1
    Conserved Domains (1) summary
    cl23754
    Location:42 → 183
    EamA; EamA-like transporter family

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041767.1 Reference Mmul_10 Primary Assembly

    Range
    19963422..19971880 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015114236.2 → XP_014969722.1  GDP-fucose transporter 1 isoform X2

    UniProtKB/TrEMBL
    F6T786, H9EWX0
    Related
    ENSMMUP00000037115.1, ENSMMUT00000044109.3
    Conserved Domains (1) summary
    cl26744
    Location:26 → 290
    TPT; Triose-phosphate Transporter family

  2. XM_015114234.2 → XP_014969720.1  GDP-fucose transporter 1 isoform X2

    UniProtKB/TrEMBL
    F6T786, H9EWX0
    Conserved Domains (1) summary
    cl26744
    Location:26 → 290
    TPT; Triose-phosphate Transporter family

  3. XM_028832762.1 → XP_028688595.1  GDP-fucose transporter 1 isoform X1

    UniProtKB/TrEMBL
    H9EWX0
    Conserved Domains (1) summary
    cl26744
    Location:41 → 305
    TPT; Triose-phosphate Transporter family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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