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TMC6 transmembrane channel like 6 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 714977, updated on 17-Aug-2024

Summary

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Official Symbol
TMC6provided by VGNC
Official Full Name
transmembrane channel like 6provided by VGNC
Primary source
VGNC:VGNC:79109
See related
Ensembl:ENSMMUG00000011932
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TMC6 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
21
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (74481622..74497820, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (71929498..71946555, complement)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene trinucleotide repeat containing adaptor 6C Neighboring gene uncharacterized LOC114673194 Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane channel like 8 Neighboring gene uncharacterized LOC114673195 Neighboring gene chromosome 16 C17orf99 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mechanosensitive monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane channel-like protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    74481622..74497820 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028836856.1 → XP_028692689.1  transmembrane channel-like protein 6 isoform X1

    UniProtKB/TrEMBL
    F6V4N8, F7HKR0, G7NGZ6
    Related
    ENSMMUP00000033993.3, ENSMMUT00000040964.3
    Conserved Domains (1) summary
    pfam07810
    Location:541 → 647
    TMC; TMC domain

  2. XM_028836857.1 → XP_028692690.1  transmembrane channel-like protein 6 isoform X2

    UniProtKB/TrEMBL
    G7NGZ6
    Conserved Domains (1) summary
    pfam07810
    Location:540 → 646
    TMC; TMC domain

  3. XM_028836855.1 → XP_028692688.1  transmembrane channel-like protein 6 isoform X1

    UniProtKB/TrEMBL
    F6V4N8, F7HKR0, G7NGZ6
    Related
    ENSMMUP00000015650.4, ENSMMUT00000016713.4
    Conserved Domains (1) summary
    pfam07810
    Location:541 → 647
    TMC; TMC domain

  4. XM_028836858.1 → XP_028692691.1  transmembrane channel-like protein 6 isoform X3

    UniProtKB/TrEMBL
    A0A5F8ABB9
    Related
    ENSMMUP00000075170.1, ENSMMUT00000085854.1
    Conserved Domains (1) summary
    pfam07810
    Location:541 → 647
    TMC; TMC domain
Nucleotide Protein
Heading Accession and Version

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