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STN1 STN1 subunit of CST complex [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 714968, updated on 17-Aug-2024

Summary

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Official Symbol
STN1provided by VGNC
Official Full Name
STN1 subunit of CST complexprovided by VGNC
Primary source
VGNC:VGNC:78219
See related
Ensembl:ENSMMUG00000015323
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
OBFC1
Orthologs
human mouse all
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Genomic context

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See STN1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (104441532..104479977, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (99701297..99738285, complement)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene SH3 and PX domains 2A Neighboring gene uncharacterized LOC114670031 Neighboring gene uncharacterized LOC114670143 Neighboring gene STE20 like kinase Neighboring gene microRNA mir-936

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CST complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of DNA replication factor A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in chromosome, telomeric region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CST complex subunit STN1
Names
STN1, CST complex subunit
oligonucleotide/oligosaccharide binding fold containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266590.1 → NP_001253519.1  CST complex subunit STN1

    See identical proteins and their annotated locations for NP_001253519.1

    Status: PROVISIONAL

    Source sequence(s)
    JV636384
    UniProtKB/TrEMBL
    A0A8J8XDQ4, F6PY41, G7N127, H9EWF7
    Related
    ENSMMUP00000065472.1, ENSMMUT00000080143.1
    Conserved Domains (2) summary
    cd04483
    Location:58 → 155
    hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
    pfam09170
    Location:157 → 333
    STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    104441532..104479977 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028853528.1 → XP_028709361.1  CST complex subunit STN1 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XDQ4, G7N127, H9EWF7
    Conserved Domains (2) summary
    cd04483
    Location:58 → 155
    hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
    pfam09170
    Location:157 → 317
    STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

  2. XM_028853530.1 → XP_028709363.1  CST complex subunit STN1 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XDQ4, G7N127, H9EWF7
    Conserved Domains (2) summary
    cd04483
    Location:58 → 155
    hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
    pfam09170
    Location:157 → 317
    STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

  3. XM_028853529.1 → XP_028709362.1  CST complex subunit STN1 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XDQ4, G7N127, H9EWF7
    Conserved Domains (2) summary
    cd04483
    Location:58 → 155
    hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
    pfam09170
    Location:157 → 317
    STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

  4. XM_028853531.1 → XP_028709364.1  CST complex subunit STN1 isoform X2

    UniProtKB/TrEMBL
    A0A8J8XDQ4, F6PY41, G7N127, H9EWF7
    Related
    ENSMMUP00000020094.2, ENSMMUT00000021485.4
    Conserved Domains (2) summary
    cd04483
    Location:58 → 155
    hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
    pfam09170
    Location:157 → 333
    STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

  5. XM_028853532.1 → XP_028709365.1  CST complex subunit STN1 isoform X3

    UniProtKB/TrEMBL
    A0A8J8XDQ4, G7N127, H9EWF7
    Conserved Domains (2) summary
    cd04483
    Location:58 → 155
    hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
    pfam09170
    Location:157 → 316
    STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

  6. XM_028853533.1 → XP_028709366.1  CST complex subunit STN1 isoform X4

    UniProtKB/TrEMBL
    A0A8J8XDQ4, G7N127, H9EWF7
    Conserved Domains (2) summary
    cd04483
    Location:58 → 155
    hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
    pfam09170
    Location:157 → 316
    STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1
Nucleotide Protein
Heading Accession and Version

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