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PRKCSH PRKCSH beta subunit of glucosidase II [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 714650, updated on 17-Aug-2024

Summary

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Official Symbol
PRKCSHprovided by VGNC
Official Full Name
PRKCSH beta subunit of glucosidase IIprovided by VGNC
Primary source
VGNC:VGNC:76417
See related
Ensembl:ENSMMUG00000002328
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PRKCSH in Genome Data Viewer
Location:
chromosome: 19
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (11191683..11206725)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (11471281..11486575)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene erythropoietin receptor Neighboring gene ral guanine nucleotide dissociation stimulator like 3 Neighboring gene outer dynein arm docking complex subunit 3 Neighboring gene small nucleolar RNA U13 Neighboring gene basic proline-rich protein-like Neighboring gene ELAV like RNA binding protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in liver development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glucosidase II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosidase 2 subunit beta
Names
protein kinase C substrate 80K-H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    11191683..11206725
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015122953.2 → XP_014978439.1  glucosidase 2 subunit beta isoform X1

    UniProtKB/TrEMBL
    F7C6C6, G7NL79
    Conserved Domains (4) summary
    pfam12999
    Location:21 → 163
    PRKCSH-like; Glucosidase II beta subunit-like
    smart00192
    Location:70 → 105
    LDLa; Low-density lipoprotein receptor domain class A
    pfam13202
    Location:216 → 236
    EF-hand_5; EF hand
    cl06793
    Location:386 → 518
    PRKCSH; Glucosidase II beta subunit-like protein

  2. XM_015122952.2 → XP_014978438.1  glucosidase 2 subunit beta isoform X1

    UniProtKB/TrEMBL
    F7C6C6, G7NL79
    Conserved Domains (4) summary
    pfam12999
    Location:21 → 163
    PRKCSH-like; Glucosidase II beta subunit-like
    smart00192
    Location:70 → 105
    LDLa; Low-density lipoprotein receptor domain class A
    pfam13202
    Location:216 → 236
    EF-hand_5; EF hand
    cl06793
    Location:386 → 518
    PRKCSH; Glucosidase II beta subunit-like protein

  3. XM_028839109.1 → XP_028694942.1  glucosidase 2 subunit beta isoform X2

    UniProtKB/TrEMBL
    G7NL79
    Conserved Domains (3) summary
    pfam12999
    Location:21 → 163
    PRKCSH-like; Glucosidase II beta subunit-like
    pfam13202
    Location:216 → 236
    EF-hand_5; EF hand
    cl06793
    Location:379 → 511
    PRKCSH; Glucosidase II beta subunit-like protein

  4. XM_015122955.2 → XP_014978441.1  glucosidase 2 subunit beta isoform X2

    UniProtKB/TrEMBL
    G7NL79
    Conserved Domains (3) summary
    pfam12999
    Location:21 → 163
    PRKCSH-like; Glucosidase II beta subunit-like
    pfam13202
    Location:216 → 236
    EF-hand_5; EF hand
    cl06793
    Location:379 → 511
    PRKCSH; Glucosidase II beta subunit-like protein

  5. XM_015122954.2 → XP_014978440.1  glucosidase 2 subunit beta isoform X1

    UniProtKB/TrEMBL
    F7C6C6, G7NL79
    Related
    ENSMMUP00000003116.3, ENSMMUT00000003300.4
    Conserved Domains (4) summary
    pfam12999
    Location:21 → 163
    PRKCSH-like; Glucosidase II beta subunit-like
    smart00192
    Location:70 → 105
    LDLa; Low-density lipoprotein receptor domain class A
    pfam13202
    Location:216 → 236
    EF-hand_5; EF hand
    cl06793
    Location:386 → 518
    PRKCSH; Glucosidase II beta subunit-like protein

  6. XM_028839110.1 → XP_028694943.1  glucosidase 2 subunit beta isoform X2

    UniProtKB/TrEMBL
    G7NL79
    Conserved Domains (3) summary
    pfam12999
    Location:21 → 163
    PRKCSH-like; Glucosidase II beta subunit-like
    pfam13202
    Location:216 → 236
    EF-hand_5; EF hand
    cl06793
    Location:379 → 511
    PRKCSH; Glucosidase II beta subunit-like protein
Nucleotide Protein
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