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YIPF1 Yip1 domain family member 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 714632, updated on 5-Mar-2024

Summary

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Gene symbol
YIPF1
Gene description
Yip1 domain family member 1
See related
Ensembl:ENSMMUG00000003546
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See YIPF1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (170530331..170579206)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (53521867..53562173, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 42 Neighboring gene intraflagellar transport 25 Neighboring gene iodothyronine deiodinase 1 Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene NDC1 transmembrane nucleoporin Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein YIPF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    170530331..170579206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028833576.1 → XP_028689409.1  protein YIPF1

    UniProtKB/TrEMBL
    A0A5F8AD59, F6YLI1, F7CNA0
    Conserved Domains (1) summary
    pfam04893
    Location:86 → 268
    Yip1; Yip1 domain

  2. XM_015140058.2 → XP_014995544.2  protein YIPF1

    UniProtKB/TrEMBL
    A0A5F8AD59, F6YLI1, F7CNA0
    Related
    ENSMMUP00000040143.3, ENSMMUT00000047118.3
    Conserved Domains (1) summary
    pfam04893
    Location:86 → 268
    Yip1; Yip1 domain

  3. XM_028833575.1 → XP_028689408.1  protein YIPF1

    UniProtKB/TrEMBL
    A0A5F8AD59, F6YLI1, F7CNA0
    Related
    ENSMMUP00000001891.4, ENSMMUT00000002005.4
    Conserved Domains (1) summary
    pfam04893
    Location:86 → 268
    Yip1; Yip1 domain

RNA

  1. XR_001445298.2 RNA Sequence

  2. XR_001445304.2 RNA Sequence

  3. XR_001445302.2 RNA Sequence

  4. XR_001445306.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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