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ATXN7L3 ataxin 7 like 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 714437, updated on 17-Aug-2024

Summary

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Official Symbol
ATXN7L3provided by VGNC
Official Full Name
ataxin 7 like 3provided by VGNC
Primary source
VGNC:VGNC:70128
See related
Ensembl:ENSMMUG00000019923
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ATXN7L3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (55454501..55462712, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (50063992..50071034, complement)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene homologous recombination factor with OB-fold Neighboring gene ankyrin repeat and SOCS box containing 16 Neighboring gene transmembrane and ubiquitin like domain containing 2 Neighboring gene upstream binding transcription factor Neighboring gene uncharacterized LOC106994058 Neighboring gene SHC-transforming protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DUBm complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-7-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    55454501..55462712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028836570.1 → XP_028692403.1  ataxin-7-like protein 3 isoform X9

    Conserved Domains (2) summary
    pfam08209
    Location:87 → 119
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:241 → 270
    SCA7; zinc-binding domain

  2. XM_028836571.1 → XP_028692404.1  ataxin-7-like protein 3 isoform X10

    Conserved Domains (2) summary
    pfam08209
    Location:80 → 112
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:234 → 263
    SCA7; zinc-binding domain

  3. XM_028836572.1 → XP_028692405.1  ataxin-7-like protein 3 isoform X10

    Conserved Domains (2) summary
    pfam08209
    Location:80 → 112
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:234 → 263
    SCA7; zinc-binding domain

  4. XM_015119848.2 → XP_014975334.1  ataxin-7-like protein 3 isoform X1

    Conserved Domains (2) summary
    pfam08209
    Location:140 → 172
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:294 → 323
    SCA7; zinc-binding domain

  5. XM_001114315.4 → XP_001114315.2  ataxin-7-like protein 3 isoform X8

    See identical proteins and their annotated locations for XP_001114315.2

    Related
    ENSMMUP00000026180.3, ENSMMUT00000027985.4
    Conserved Domains (2) summary
    pfam08209
    Location:133 → 165
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:261 → 290
    SCA7; zinc-binding domain

  6. XM_015119851.2 → XP_014975337.1  ataxin-7-like protein 3 isoform X4

    Conserved Domains (2) summary
    pfam08209
    Location:133 → 165
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:280 → 309
    SCA7; zinc-binding domain

  7. XM_001114294.4 → XP_001114294.1  ataxin-7-like protein 3 isoform X7

    See identical proteins and their annotated locations for XP_001114294.1

    Conserved Domains (2) summary
    pfam08209
    Location:133 → 165
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:268 → 297
    SCA7; zinc-binding domain

  8. XM_015119849.2 → XP_014975335.1  ataxin-7-like protein 3 isoform X3

    Conserved Domains (2) summary
    pfam08209
    Location:133 → 165
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:287 → 316
    SCA7; zinc-binding domain

  9. XM_015119853.2 → XP_014975339.1  ataxin-7-like protein 3 isoform X6

    Conserved Domains (2) summary
    pfam08209
    Location:140 → 172
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:268 → 297
    SCA7; zinc-binding domain

  10. XM_015119850.2 → XP_014975336.1  ataxin-7-like protein 3 isoform X2

    Conserved Domains (2) summary
    pfam08209
    Location:140 → 172
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:287 → 316
    SCA7; zinc-binding domain

  11. XM_015119852.2 → XP_014975338.1  ataxin-7-like protein 3 isoform X5

    Conserved Domains (2) summary
    pfam08209
    Location:140 → 172
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:275 → 304
    SCA7; zinc-binding domain
Nucleotide Protein
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