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PCID2 PCI domain containing 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 714247, updated on 17-Aug-2024

Summary

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Official Symbol
PCID2provided by VGNC
Official Full Name
PCI domain containing 2provided by VGNC
Primary source
VGNC:VGNC:75680
See related
Ensembl:ENSMMUG00000001041
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PCID2 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (94401857..94454440, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (94636016..94688237, complement)

Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673492 Neighboring gene uncharacterized LOC106994402 Neighboring gene coagulation factor X Neighboring gene protein Z, vitamin K dependent plasma glycoprotein Neighboring gene cullin 4A Neighboring gene U6 spliceosomal RNA Neighboring gene lysosomal associated membrane protein 1 Neighboring gene growth hormone regulated TBC protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription export complex 2 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PCI domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041770.1 Reference Mmul_10 Primary Assembly

    Range
    94401857..94454440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015121503.2 → XP_014976989.2  PCI domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZK61
    Conserved Domains (1) summary
    cl02111
    Location:80 → 368
    PCI; PCI domain

  2. XM_015121505.2 → XP_014976991.1  PCI domain-containing protein 2 isoform X5

    UniProtKB/TrEMBL
    F6SAU1, F6SAW0, H9EUI7
    Related
    ENSMMUP00000018126.3, ENSMMUT00000019355.4
    Conserved Domains (1) summary
    cl02111
    Location:80 → 393
    PCI; PCI domain

  3. XM_015121504.2 → XP_014976990.1  PCI domain-containing protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A5F7ZK61
    Conserved Domains (1) summary
    cl02111
    Location:80 → 368
    PCI; PCI domain

  4. XM_015121506.2 → XP_014976992.1  PCI domain-containing protein 2 isoform X5

    UniProtKB/TrEMBL
    F6SAU1, F6SAW0, H9EUI7
    Conserved Domains (1) summary
    cl02111
    Location:80 → 393
    PCI; PCI domain

  5. XM_028837367.1 → XP_028693200.1  PCI domain-containing protein 2 isoform X1

    Conserved Domains (1) summary
    cl02111
    Location:80 → 368
    PCI; PCI domain

  6. XM_028837370.1 → XP_028693203.1  PCI domain-containing protein 2 isoform X5

    UniProtKB/TrEMBL
    F6SAU1, F6SAW0, H9EUI7
    Conserved Domains (1) summary
    cl02111
    Location:80 → 393
    PCI; PCI domain

  7. XM_002800841.3 → XP_002800887.1  PCI domain-containing protein 2 isoform X5

    See identical proteins and their annotated locations for XP_002800887.1

    UniProtKB/TrEMBL
    F6SAU1, F6SAW0, H9EUI7
    Related
    ENSMMUP00000001397.4, ENSMMUT00000001486.4
    Conserved Domains (1) summary
    cl02111
    Location:80 → 393
    PCI; PCI domain

  8. XM_028837368.1 → XP_028693201.1  PCI domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZK61
    Conserved Domains (1) summary
    cl02111
    Location:80 → 368
    PCI; PCI domain

RNA

  1. XR_003724232.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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