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TENT4A terminal nucleotidyltransferase 4A [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713853, updated on 17-Aug-2024

Summary

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Official Symbol
TENT4Aprovided by VGNC
Official Full Name
terminal nucleotidyltransferase 4Aprovided by VGNC
Primary source
VGNC:VGNC:78394
Locus tag
EGK_16348
See related
Ensembl:ENSMMUG00000013189
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
PAPD7
Orthologs
human mouse all
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Genomic context

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See TENT4A in Genome Data Viewer
Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (6639937..6683469)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (6572803..6615050)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene NOP2/Sun RNA methyltransferase 2 Neighboring gene steroid 5 alpha-reductase 1 Neighboring gene uncharacterized LOC106998645 Neighboring gene uncharacterized LOC114678739 Neighboring gene uncharacterized LOC114678740

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A) RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAMP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
terminal nucleotidyltransferase 4A
Names
DNA polymerase sigma
poly(A) RNA polymerase D7, non-canonical
NP_001248228.1
XP_028705102.1
XP_028705103.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001261299.1 → NP_001248228.1  terminal nucleotidyltransferase 4A

    See identical proteins and their annotated locations for NP_001248228.1

    Status: PROVISIONAL

    Source sequence(s)
    JV046041
    UniProtKB/TrEMBL
    A0A8J8XUS5, G7MUM2, H9FP74, I2CT95
    Conserved Domains (2) summary
    cd05402
    Location:10 → 121
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam03828
    Location:178 → 238
    PAP_assoc; Cid1 family poly A polymerase

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    6639937..6683469
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028849269.1 → XP_028705102.1  terminal nucleotidyltransferase 4A isoform X1

    UniProtKB/TrEMBL
    A0A5F8A3Q4, F6XQ15
    Related
    ENSMMUP00000017325.4, ENSMMUT00000018501.4
    Conserved Domains (1) summary
    COG5260
    Location:239 → 544
    TRF4; DNA polymerase sigma [Replication, recombination and repair]

  2. XM_028849270.1 → XP_028705103.1  terminal nucleotidyltransferase 4A isoform X2

    UniProtKB/TrEMBL
    A0A5F8A3Q4
    Conserved Domains (2) summary
    COG5260
    Location:239 → 544
    TRF4; DNA polymerase sigma [Replication, recombination and repair]
    cl40450
    Location:627 → 728
    KLF8_12_N; N-terminal domain of Kruppel-like factor (KLF) 8, KLF12, and similar proteins
Nucleotide Protein
Heading Accession and Version

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