U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GATA3 GATA binding protein 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713840, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
GATA3provided by VGNC
Official Full Name
GATA binding protein 3provided by VGNC
Primary source
VGNC:VGNC:72889
Locus tag
EGK_19445
See related
Ensembl:ENSMMUG00000006944
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GATA3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (9145130..9174939)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (8013351..8033683)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 3 Neighboring gene uncharacterized LOC114670100 Neighboring gene uncharacterized LOC114669882 Neighboring gene uncharacterized LOC114670101 Neighboring gene pre-mRNA-splicing factor 38A pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of epithelial cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
trans-acting T-cell-specific transcription factor GATA-3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    9145130..9174939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028825952.1 → XP_028681785.1  trans-acting T-cell-specific transcription factor GATA-3 isoform X1

    UniProtKB/TrEMBL
    A0A5S6R753, A0A8J8YEY1, F7E1F3, G7N1K1, H9Z7L5
    Conserved Domains (2) summary
    PHA03377
    Location:1 → 261
    PHA03377; EBNA-3C; Provisional
    cd00202
    Location:317 → 367
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

  2. XM_028825953.1 → XP_028681786.1  trans-acting T-cell-specific transcription factor GATA-3 isoform X1

    UniProtKB/TrEMBL
    A0A5S6R753, A0A8J8YEY1, F7E1F3, G7N1K1, H9Z7L5
    Conserved Domains (2) summary
    PHA03377
    Location:1 → 261
    PHA03377; EBNA-3C; Provisional
    cd00202
    Location:317 → 367
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

  3. XM_001108337.4 → XP_001108337.1  trans-acting T-cell-specific transcription factor GATA-3 isoform X1

    See identical proteins and their annotated locations for XP_001108337.1

    UniProtKB/TrEMBL
    A0A5S6R753, A0A8J8YEY1, F7E1F3, G7N1K1, H9Z7L5
    Related
    ENSMMUP00000009115.4, ENSMMUT00000009704.4
    Conserved Domains (2) summary
    PHA03377
    Location:1 → 261
    PHA03377; EBNA-3C; Provisional
    cd00202
    Location:317 → 367
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

  4. XM_015146429.2 → XP_015001915.1  trans-acting T-cell-specific transcription factor GATA-3 isoform X2

    UniProtKB/TrEMBL
    H9Z7L5
    Conserved Domains (2) summary
    smart00401
    Location:312 → 361
    ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
    cd00202
    Location:316 → 366
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials