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CTSF cathepsin F [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713743, updated on 17-Aug-2024

Summary

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Official Symbol
CTSFprovided by VGNC
Official Full Name
cathepsin Fprovided by VGNC
Primary source
VGNC:VGNC:71555
See related
Ensembl:ENSMMUG00000002496
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CTSF in Genome Data Viewer
Location:
chromosome: 14
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (7979397..7984822)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (7852065..7857398)

Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene copper chaperone for superoxide dismutase Neighboring gene coiled-coil domain containing 87 Neighboring gene actinin alpha 3 Neighboring gene zinc finger DHHC-type containing 24 Neighboring gene Bardet-Biedl syndrome 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: cathepsin F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041767.1 Reference Mmul_10 Primary Assembly

    Range
    7979397..7984822
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015113633.2 → XP_014969119.2  LOW QUALITY PROTEIN: cathepsin F

    UniProtKB/TrEMBL
    G7NC50
    Related
    ENSMMUP00000061215.1, ENSMMUT00000101911.1
    Conserved Domains (2) summary
    smart00848
    Location:193 → 249
    Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
    pfam00112
    Location:277 → 487
    Peptidase_C1; Papain family cysteine protease
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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