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TEFM transcription elongation factor, mitochondrial [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713684, updated on 17-Aug-2024

Summary

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Official Symbol
TEFMprovided by VGNC
Official Full Name
transcription elongation factor, mitochondrialprovided by VGNC
Primary source
VGNC:VGNC:104664
See related
Ensembl:ENSMMUG00000052827
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TEFM in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (28431878..28438981, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (24852523..24859827, complement)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene cytokine receptor like factor 3 Neighboring gene ATPase family AAA domain containing 5 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114673090 Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene 40S ribosomal protein S27-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA polymerase processivity factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by mitochondrial RNA polymerase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    28431878..28438981 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001112593.4 → XP_001112593.2  transcription elongation factor, mitochondrial

    UniProtKB/TrEMBL
    A0A5F7ZD17, G7NGT9
    Related
    ENSMMUP00000063504.1, ENSMMUT00000105251.1
    Conserved Domains (2) summary
    cl21482
    Location:138 → 353
    RuvC_like; Crossover junction endodeoxyribonuclease RuvC and similar proteins
    cl22429
    Location:77 → 119
    HHH_5; Helix-hairpin-helix domain
Nucleotide Protein
Heading Accession and Version

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Research Materials