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CACFD1 calcium channel flower domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713680, updated on 17-Aug-2024

Summary

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Official Symbol
CACFD1provided by VGNC
Official Full Name
calcium channel flower domain containing 1provided by VGNC
Primary source
VGNC:VGNC:70485
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CACFD1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (4782449..4793245, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (4891123..4903171, complement)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene myomaker, myoblast fusion factor Neighboring gene solute carrier family 2 member 6 Neighboring gene uncharacterized LOC114672700 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 13 Neighboring gene REX4 homolog, 3'-5' exonuclease

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium channel flower homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    4782449..4793245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001100830.4 → XP_001100830.1  calcium channel flower homolog isoform X2

    See identical proteins and their annotated locations for XP_001100830.1

    UniProtKB/TrEMBL
    G7NFA0
    Conserved Domains (1) summary
    smart01077
    Location:35 → 143
    Cg6151-P; Uncharacterized conserved protein CG6151-P

  2. XM_015116446.2 → XP_014971932.1  calcium channel flower homolog isoform X1

    Conserved Domains (1) summary
    smart01077
    Location:199 → 300
    Cg6151-P; Uncharacterized conserved protein CG6151-P
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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