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NEDD1 NEDD1 gamma-tubulin ring complex targeting factor [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713673, updated on 17-Aug-2024

Summary

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Official Symbol
NEDD1provided by VGNC
Official Full Name
NEDD1 gamma-tubulin ring complex targeting factorprovided by VGNC
Primary source
VGNC:VGNC:75301
See related
Ensembl:ENSMMUG00000004093
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See NEDD1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (96713611..96759762)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (96755014..96801228)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 54 Neighboring gene elongation factor 1-alpha 1-like Neighboring gene NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial pseudogene Neighboring gene uncharacterized LOC107000989 Neighboring gene microRNA mir-1251

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in pericentriolar material IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein NEDD1
Names
neural precursor cell expressed, developmentally down-regulated 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    96713611..96759762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015152494.2 → XP_015007980.1  protein NEDD1 isoform X1

    UniProtKB/TrEMBL
    F6TTW3, F6ZCS2
    Related
    ENSMMUP00000005469.4, ENSMMUT00000005807.4
    Conserved Domains (3) summary
    COG2319
    Location:3 → 278
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:24 → 299
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:81 → 117
    7WD40; WD40 repeat [structural motif]

  2. XM_028829793.1 → XP_028685626.1  protein NEDD1 isoform X3

    UniProtKB/TrEMBL
    F6TTW3
    Conserved Domains (2) summary
    cd00200
    Location:2 → 210
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:34 → 71
    7WD40; WD40 repeat [structural motif]

  3. XM_015152491.2 → XP_015007977.1  protein NEDD1 isoform X1

    UniProtKB/TrEMBL
    F6TTW3, F6ZCS2
    Conserved Domains (3) summary
    COG2319
    Location:3 → 278
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:24 → 299
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:81 → 117
    7WD40; WD40 repeat [structural motif]

  4. XM_015152495.2 → XP_015007981.1  protein NEDD1 isoform X1

    UniProtKB/TrEMBL
    F6TTW3, F6ZCS2
    Conserved Domains (3) summary
    COG2319
    Location:3 → 278
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:24 → 299
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:81 → 117
    7WD40; WD40 repeat [structural motif]

  5. XM_015152493.2 → XP_015007979.1  protein NEDD1 isoform X2

    UniProtKB/TrEMBL
    F6TTW3
    Conserved Domains (3) summary
    COG2319
    Location:20 → 240
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:12 → 230
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:12 → 48
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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