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UBQLN1 ubiquilin 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713525, updated on 5-Mar-2024

Summary

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Gene symbol
UBQLN1
Gene description
ubiquilin 1
Locus tag
EGK_07819
See related
Ensembl:ENSMMUG00000005024
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See UBQLN1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (98970580..99018636, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (99979193..100027291, complement)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene U4 spliceosomal RNA Neighboring gene IDNK gluconokinase Neighboring gene uncharacterized LOC114672828 Neighboring gene G kinase anchoring protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquilin-1
Names
Protein linking IAP with cytoskeleton 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    98970580..99018636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015118002.2 → XP_014973488.1  ubiquilin-1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QF94, A0A5F7ZJS9, A0A8J8XZ91, G7NGE8
    Related
    ENSMMUP00000046713.2, ENSMMUT00000067011.2
    Conserved Domains (3) summary
    smart00727
    Location:390 → 422
    STI1; Heat shock chaperonin-binding motif
    cd01808
    Location:37 → 107
    hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
    cd14399
    Location:546 → 585
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

  2. XM_015118003.2 → XP_014973489.1  ubiquilin-1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5QF94, H9ETL1
    Related
    ENSMMUP00000053490.1, ENSMMUT00000056252.2
    Conserved Domains (3) summary
    smart00727
    Location:182 → 219
    STI1; Heat shock chaperonin-binding motif
    cd01808
    Location:37 → 107
    hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
    cd14399
    Location:518 → 557
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
Nucleotide Protein
Heading Accession and Version

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