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UBE4B ubiquitination factor E4B [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713348, updated on 17-Aug-2024

Summary

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Official Symbol
UBE4Bprovided by VGNC
Official Full Name
ubiquitination factor E4Bprovided by VGNC
Primary source
VGNC:VGNC:78700
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See UBE4B in Genome Data Viewer
Location:
chromosome: 1
Exon count:
20
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (214286110..214433669, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (9239772..9387354)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene phosphogluconate dehydrogenase Neighboring gene kinesin family member 1B Neighboring gene U6 spliceosomal RNA Neighboring gene retinol binding protein 7 Neighboring gene nicotinamide nucleotide adenylyltransferase 1 Neighboring gene microRNA mir-5697

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-ubiquitin ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin conjugation factor E4 B
Names
ubiquitination factor E4B (UFD2 homolog, yeast)
XP_028695867.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    214286110..214433669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028840034.1 → XP_028695867.1  ubiquitin conjugation factor E4 B

    UniProtKB/TrEMBL
    F7GUJ1, G8F1M1, H9EN76
    Conserved Domains (2) summary
    cd16658
    Location:1095 → 1169
    RING-Ubox_UBE4B; U-box domain, a modified RING finger, found in ubiquitin conjugation factor E4 B (UBE4B) and similar proteins
    pfam10408
    Location:462 → 1082
    Ufd2P_core; Ubiquitin elongating factor core
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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